Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00690 ATGCGTGGGTACAGTCCACAATACTACAGTCCGCCCAGAAGGGGATACGGGAGGAGCCCTCCTAGAAGGGGATATGGTGGAGGTAGACGCAGGGAACAGAATCATGGGAGTCTTTTGGTTAGGAATATTCCTTTAGATTGCAGATCAGAGGAACTTCGTGGACCCTTTGAGAAGTATGGACCTGTCAGGGATGTCTACATTCCCAAAGACTATTACACGGGTGAACCACGGGGATTTGCATTTGTGGAGTTTGTGGATCCATACGATGCCTTGGAGGCACAGTATCATATGAATGGTAAAATCTTTGCTGGACGTGAGATATCTGTTGTCATTGCAGCGGAGTCAAGGAAAAGGCCAGAAGAAATGCGTCGAAGGACTAGAGAAACATCAGGCCATGGAGGAAGATGGTCTTCTTATTATGGACGTTCTCGGTCTCGTTCAATTTCCCGATCACGGTCTCCTTTCTATCCATCGAGCTCTAGAAGTCGCTACCGCTCTAGGTCCTACTCTCCTGTTCCAAGGCGGCGAAGTGACTATTCTGTCTCCCCCAGTAGGAGACGTGGGGATCACCCAAAATCACCAAGAGATACACATCGAGAGCATGATTATGATCACAACCATGGATCATACTCGCCAGGTCATGATGAAAGCAATGGATATAGAGCGAAATTATCACCTCCTGGATCTGGTTCAAGATCTGCTGATCTTTCCCCTGGGCGTAGCAAATGA 729 0.4815 MRGYSPQYYSPPRRGYGRSPPRRGYGGGRRREQNHGSLLVRNIPLDCRSEELRGPFEKYGPVRDVYIPKDYYTGEPRGFAFVEFVDPYDALEAQYHMNGKIFAGREISVVIAAESRKRPEEMRRRTRETSGHGGRWSSYYGRSRSRSISRSRSPFYPSSSRSRYRSRSYSPVPRRRSDYSVSPSRRRGDHPKSPRDTHREHDYDHNHGSYSPGHDESNGYRAKLSPPGSGSRSADLSPGRSK* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00690 242 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 31 212 - -
Pte8g00690 242 MobiDBLite consensus disorder prediction 1 37 - -
Pte8g00690 242 SMART rrm1_1 37 110 IPR000504 GO:0003723
Pte8g00690 242 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Pte8g00690 242 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Pte8g00690 242 MobiDBLite consensus disorder prediction 140 177 - -
Pte8g00690 242 FunFam Serine/arginine-rich SC35-like splicing factor SCL30 isoform A 29 168 - -
Pte8g00690 242 MobiDBLite consensus disorder prediction 115 242 - -
Pte8g00690 242 MobiDBLite consensus disorder prediction 179 211 - -
Pte8g00690 242 Gene3D - 28 146 IPR012677 -
Pte8g00690 242 MobiDBLite consensus disorder prediction 115 131 - -
Pte8g00690 242 SUPERFAMILY RNA-binding domain, RBD 33 142 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00690 Pte-Chr8 29883296 29886968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00690 3 99 Eukaryotic Initiation Factors Gene Family AT3G11400 36.082 5.57e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00690 K12900 - mof:131165322 227.639