Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00689 ATGGGTTGCTGTTTCAGTGCTAGAATCAAAGCTGAGAGCCCTCCCCACAAGGGATCGACTTCAAACTATGAAAGTAAAGGTAGAGCTGTTTCGAGTGGTCGTACCTTTGCCTCAGTGCCTCCAACCCCTCGTACTGAGGGTGAGATTTTGCAGTCCTCCAATTTGAAAAATTTCTCCTTTAATGATCTAAGAACTGCCACAAGAAACTTCCGTCCAGATAGTGTGGTGGGTGAAGGTGGATTTGGCTGTGTATTCAAGGGGTGGATAGATGAGCATACGCTCGCAGCTTGTAGACCCGGTACTGGAATGGTCATTGCTGTGAAGAAGCTTAACCAAGAAGGCTTTCAGGGTCATAGTGAATGGCTGACTGAGATAAACTATCTGGGGCAGCTGCATCATAATAATCTTGTAAAGATGATTGGTTACTGCTTAGAGGATGATCAAAGACTTCTGGTCTATGAATTTATGCCCAAGGGCAGTTTGGATAATCACCTGTTTAGGAGAGCTTCTTACTTTCAACCGCTTTCTTGGAGCCTCCGGATGAAAGTTGCACTCGATGCTGCAAAAGGTCTAGCATTTCTTCACAGTGATGAGGCCAAAGTGATATATAGAGACTTGAAAACCTCTAATATATTACTTGATTCGCATTACAATGCAAAACTCTCTGACTTTGGATTAGCAAAGGATGGACCAGCAGGTGATAACAGCCATGTCTCTACAAGGGTGATGGGCACGTATGGCTATGCAGCGCCTGAATATATGGCCACAGGTATTAATGGTCTCATACTGTGGATCTCAATGTCTACTTGTGGTTAA 816 0.4424 MGCCFSARIKAESPPHKGSTSNYESKGRAVSSGRTFASVPPTPRTEGEILQSSNLKNFSFNDLRTATRNFRPDSVVGEGGFGCVFKGWIDEHTLAACRPGTGMVIAVKKLNQEGFQGHSEWLTEINYLGQLHHNNLVKMIGYCLEDDQRLLVYEFMPKGSLDNHLFRRASYFQPLSWSLRMKVALDAAKGLAFLHSDEAKVIYRDLKTSNILLDSHYNAKLSDFGLAKDGPAGDNSHVSTRVMGTYGYAAPEYMATGINGLILWISMSTCG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00689 271 Gene3D Transferase(Phosphotransferase) domain 1 156 261 - -
Pte8g00689 271 MobiDBLite consensus disorder prediction 15 46 - -
Pte8g00689 271 FunFam Serine/threonine-protein kinase BIK1 37 155 - -
Pte8g00689 271 Pfam Protein kinase domain 73 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00689 271 SUPERFAMILY Protein kinase-like (PK-like) 41 257 IPR011009 -
Pte8g00689 271 SMART serkin_6 70 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00689 271 MobiDBLite consensus disorder prediction 11 46 - -
Pte8g00689 271 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
Pte8g00689 271 ProSiteProfiles Protein kinase domain profile. 70 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00689 271 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Pte8g00689 271 PANTHER OS01G0588500 PROTEIN-RELATED 32 257 - -
Pte8g00689 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pte8g00689 271 FunFam Os07g0541700 protein 156 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00689 Pte-Chr8 29878710 29881811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00689 1 257 Glycoside Hydrolase AT3G07070 46.863 4.52e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte8g00689 Pkinase 1.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00689 - - gmx:100800735 438.343