Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00666 ATGGATCACTTGTTGGGTCTTCTTAGAATTCGTATTCTCAGAGGCGTTAACCTTGCTATACGAGATCTCAAAAGCAGCGACCCTTACGTGATTGTCAAGCTCGGCAAGCAAAAGCTGAAAACACGTGTGGTGAGGAAGAATCTCAATCCTGAGTGGAATGAAGAGCTGACTCTAACCATTGCAGAACCCATTGTCCCAATAAAACTTTTTGTGTATGACAAAGACATGTTTTCTCTAGATGACAAAATGGGGGATGCAGAATTTGAAATTGGTGATTTTGTGGAGGCAGTGAGGATGTTTTTCAAAAATATGCTTCCCAATGGGACTGTAATTACAAAAGTGCAGCCTACCAGACAGAACTGCTTAGCTGAAGAGAGCAACATCATATGGAAAGATGGTAAAGTTGTCCAAAACATTGTTCTTAGACTGCGTAATGTGGAGTGTGGTGAAGTTGAACTTCATCTAGAATGGATTGACATCCCTGGTGCCAAGGGTTTATAA 501 0.4132 MDHLLGLLRIRILRGVNLAIRDLKSSDPYVIVKLGKQKLKTRVVRKNLNPEWNEELTLTIAEPIVPIKLFVYDKDMFSLDDKMGDAEFEIGDFVEAVRMFFKNMLPNGTVITKVQPTRQNCLAEESNIIWKDGKVVQNIVLRLRNVECGEVELHLEWIDIPGAKGL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00666 166 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Pte8g00666 166 SMART C2_3c 7 102 IPR000008 -
Pte8g00666 166 Pfam C2 domain 6 92 IPR000008 -
Pte8g00666 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 151 IPR035892 -
Pte8g00666 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 164 IPR044562 -
Pte8g00666 166 Gene3D C2 domain 3 164 IPR035892 -
Pte8g00666 166 CDD C2_ArfGAP 16 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00666 Pte-Chr8 29637029 29638751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00666 38 166 C2H2 Transcription Factor Family AT1G70790 59.231 1.86e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00666 - - cave:132181516 257.684