Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00652 ATGAAGAGGGATCACCAGAAAGTTTATGGTGGCAGTAGTGTTGGGTATGATGGCAATTGTGATGGTACTACCAGTACTGCTGCAAAAGCTGATAGCTCGTCCATGTCAAGTGAAAAAATGAAGATGTGGGAAGACGAAGAACCAGAAGCAAGTGGAATGGATGAATTGCTTGCTGTTTTAGGTTACAAGGTACGGTCTTCAGACATGGCTACGGTTGCTCAGAAGCTTGAGCAGCTTGAGATGGCCATGGGTTCATCTCAAGAAGATGGGATTTCCCATTTAGCTTGTGATACCGTTCATTATGACCCTTCTGATATGTCTGCTTGGGTTCAAAGCATGCTTTCTGATCTGGCACCAGCCGAGTCTTCCACCACCATAACCACCTACGATCCCCAGTCCCATGTTTTTGCCCATGATTCAGAGGAAGACCTCAGGGCAATACCTGGTGTGGCTGCATACCCACAAAGCGAACTAACATCATCAACCCAAACAAGCAGGAAAAGGTCGAGACCTTCAATTGGGTCTCCCGATTCTGTTCATTTTCTACCTTCTGCTCCATCACCGACAGCCATGTCTGGGTCTTCAACTCGACCGGTCGTACTCGTTGATTCACAAGAAAACGGTGTCCGTCTCGTCCATTCTCTCTTGGCCTGTGCAGAAGCCGTTCAGCAAGGCGATGTGAAACTCGCTGATACGCTTGTGAAACACATAGGTTTGCTCACTGCAACTCAAGTCGGCGCTATGAAAAAAGTCGCAACCTTCTTCGCTCAAGCTCTGACTCGCCGGATTTACAGACTGTACCCTGCACAAGATTTTGCAGACTCTTCCAGCTCCGATCTCCTTGAGATGCATTTCTACGAGTCCTCACCTTACCTCAAATTCGCTCACTTCACCGCCAACCAAGCCATACTCGAAGCTTTCGCCACTTCTAGCAGAGTCCATGTAATTGATTTCGGACTCAAGCAAGGTATGCAATGGCCAGCTTTGATGCAGGCTCTTGCATTACGACCCGGCGGTCCACCGGCTTTCCGGTTAACTGGAATTGGGCCTCCTCAGCCGGACAACACCGACGCTCTGCAAGAAGTGGGTTGGAAGTTAGCTCAGTTGGCTGAAACCATTGGCGTCAAGTTCGAATTCCGTGGGTTTGTCTGCAACAGTTTAGCGGATCTTGATCCGTTCATGCTGGATATCCGACCCGCCGCAGTCGAAACAGTGGCTATCAATTCGGTTTTCGAGCTCCACCGTTTATTGGCCCGACCCGGAGCAATCGACAAGGTCTTGCATTCGATCAGAGCAATGAAACCTAAAATATTGACTGTCGTGGAACAAGAAGCGAATCATAACAGTCCGATTTTTCTAGACCGGTTCACGGAGGCGTTGCATTACTACTCGACCTTGTTCGACTCGCTGGAAGGATCGTCTTCCGGGTTGATTCCACCGAGTCAAGATGTTGTCATGTCGGAATTGTACTTAGGCAGACAGATGTGTAACGTGGTAGCCTCTGAAGGACCAGACCGAGTTGAAAGGCACGAGACTCTGAATCAATGGAGGATACGAATGAGCTCAGCCGGGTTCGACCCGGTTCATCTAGGATCCAATGCATTCAAGCAAGCTAGCATGCTGTTGGCTCTATTTGCAGGTGGTGATGGTTATAAAGTAGAAGAGAACAACGGTTGCCTCATGCTTGGTTGGCATACAAGACCACTCATCTCTACCTCAGCTTGGAAAATCGCTGGGGGTGAGTTGAGCGAGTTAACTCAGTGA 1764 0.4904 MKRDHQKVYGGSSVGYDGNCDGTTSTAAKADSSSMSSEKMKMWEDEEPEASGMDELLAVLGYKVRSSDMATVAQKLEQLEMAMGSSQEDGISHLACDTVHYDPSDMSAWVQSMLSDLAPAESSTTITTYDPQSHVFAHDSEEDLRAIPGVAAYPQSELTSSTQTSRKRSRPSIGSPDSVHFLPSAPSPTAMSGSSTRPVVLVDSQENGVRLVHSLLACAEAVQQGDVKLADTLVKHIGLLTATQVGAMKKVATFFAQALTRRIYRLYPAQDFADSSSSDLLEMHFYESSPYLKFAHFTANQAILEAFATSSRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQEVGWKLAQLAETIGVKFEFRGFVCNSLADLDPFMLDIRPAAVETVAINSVFELHRLLARPGAIDKVLHSIRAMKPKILTVVEQEANHNSPIFLDRFTEALHYYSTLFDSLEGSSSGLIPPSQDVVMSELYLGRQMCNVVASEGPDRVERHETLNQWRIRMSSAGFDPVHLGSNAFKQASMLLALFAGGDGYKVEENNGCLMLGWHTRPLISTSAWKIAGGELSELTQ* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00652 587 MobiDBLite consensus disorder prediction 17 37 - -
Pte8g00652 587 Pfam GRAS domain family 211 576 IPR005202 -
Pte8g00652 587 MobiDBLite consensus disorder prediction 1 49 - -
Pte8g00652 587 MobiDBLite consensus disorder prediction 151 196 - -
Pte8g00652 587 ProSiteProfiles GRAS family profile. 202 576 IPR005202 -
Pte8g00652 587 SMART DELLA_2 54 127 - -
Pte8g00652 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 155 572 IPR005202 -
Pte8g00652 587 MobiDBLite consensus disorder prediction 154 172 - -
Pte8g00652 587 Pfam Transcriptional regulator DELLA protein N terminal 54 121 IPR021914 -
Pte8g00652 587 Gene3D - 52 117 IPR038088 -
Pte8g00652 587 FunFam DELLA protein GAI 52 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00652 Pte-Chr8 29270737 29273161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00652 38 578 GRAS Transcription Factor Family AT1G14920 63.401 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte8g00652 GRAS 3e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00652 K14494 - qsa:O6P43_020590 828.55