Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00618 ATGAAGGAAAAAACTCACAAGGGTCCTTACAACCTTTGCTTGATCATAACTGGGTTTTGCAGCTTTTGCTCATGGTTCCTTTTTGTTAACTCGCAAGCAAGTACTGATGCCCCTGCAATGTTGGCTCTTAGGGAAAGCCTTCAAGTTCCAGACACTCTAGGTTGGACTGGTCCTGATCCTTGTAAATGGAACCATGTTGGTTGCTCTAACGACAAGCGAATCACCCGGATCCAAATTGGCCGCCAAAGCCTTAAAGGTACGCTTACCCCTAGTCTCCAGAACCTCACTCAATTAGAGCGGTTTGAGGTTCAGGATAACAGTATTGGGGGCCCTGTTCCTAGTTTGAAAGGGCTGAGTTCATTGCAAGTGGTTTTGCTTACCGGTAATCAGTTTAGCTATTTCCCCAGTGACTTTTTTGATGGTATGTCTGCACTGCAATCTATTGAGATTGATAAAAATCCGTTCTCGCCTTGGGAGATTCCTGAAAGTGTTAAAAACGCTACGGCACTTCAGAACTTTTCAGCTAACTCTGCTAATATCACTGGAAAAATTCCAGATTTCTTCAGTCCAGATGTGTTTCCTGGTCTCACCAATTTGCACCTGTCGTTTAATTCTCTTACTGGGGGGTTGCCCCAGAGCTTGGCTGGGTCACAAATTGAGTCCTTGTGGGTTAATGGTCAATACAGTGGAGAAAAGCTTACTGGGGATATTGATGTTATACAGAATATGACATTTTTGAAACAGCTTTGGTTGCATTCAAATGCTTTTTCGGGTCCATTGCCAGATTTTTCTGGGTTGAAAGAGTTGCAGGATTTGAGTTTGAGAGATAACATGCTCACTGGGCCTGTTCCAAGTTCCTTGATGGGTCTTAAATCACTTAAAGTTGTTAACTTGACGAATAATTTGCTTCAAGGGCCAGTGCCCGTGTTTGGACCTGATGTTGCTGTTGATATGAATGAGGATTCTAATAGATTTTGCCTACCAACTCCTGGCAATTGCGATCCCCGTGTAAACACACTGCTTTCCATTGTGAAATCGATGGGTTATCCACAAAAGCTTGCCGACGACTGGAAGGGGAATGATCCTTGTAACAATTGGTTTGGCCTTACCTGTAGCGGTGGGAACATTGTTGTAGTTAATTTTCAGAAAATGGGTCTCAGTGGTACCATTTCGCCCGATTTTGTATCACTCAAATCATTGCAAAGACTGATATTGTCTAACAACAATCTCACTGGAACAATTCCAGTTGAAATTGCTAGCCTGCCTAACCTAGCTGAACTGGATGTGTCAAACAATCGGCTTTATGGAAAAGTCCCATCCTTTAAGAATGGTGTGAATCTGCACACCCAAGGTAATGTTGATATCGGGAAGGAAAGACCTAGTAGTTCAGGTTCATCTCCATTATCTCCAGGTTCATCAACACGAGGTTCAGATGAAGGAAACGGTGGTAACTCTGGGGATGTTGGTAAGAAGTCTTCTAGTCTAGTGGGAGTGATTGTATTTTCAGTGATAGGCGGTGTTTTTGTGGTTGGATTGATTGGTTTCTTAATTTTCTGTACATTCAAGATGAAGCAAAAGCGATTAAGCAGGGTGCAGAGCCCAAATGCAATGGTCATACATCCTCGTCATTCTGGTTCTGATAACGAAAGTGTAAAGATCACAGTGGCTGGTTCTAGTGTGAGTGTTGGGGCTATTAGTGAAGCTCAAACTGTTCCTAGCAGTGAGGCTGGAGACATTCAAATGGTTGAAGCTGGAAACATGGTCATTTCTATACAAGTTCTGAGAAGTGTTACTAACAATTTCAGTGAGAAAAATATATTGGGAAGAGGGGGGTTTGGGACAGTTTACAAAGGTGAATTACATGATGGTACACAAATTGCAGTTAAGAGGATGGAATCTGGCGTGATTGCTGGGAAGGGTTTGGCAGAGTTTAAATCTGAGATTGCTGTTTTGACAAAGGTCCGACATCGGCATCTTGTTGCTCTTCTTGGATACTGCTTAGATGGGAATGAGAGGCTTCTTGTTTATGAGTACATGCCTCAAGGGACACTTAGCAGCCATATCTTTGATTGGCCAGAAGAAGGGAGAAACCCTATGGAATGGAATAGAAGGTTGACCGTTGCCTTGGATGTGGCAAGGGGTGTTGAGTATCTCCATGGGCTTGCTCATCAAAGCTTTATCCACAGAGATTTAAAACCTTCAAACATTCTTCTTGGAGATGATATGAGAGCAAAAGTTGCAGATTTTGGTCTTGTCCGTCTTGCTCCTGATGGCAAAGGCTCTTTTGAGACGAGACTTGCTGGTACCTTCGGATACTTGGCACCTGAATATGCGACTACTGGCCGCGTGACAACCAAAGTTGATGTCTACAGTTTCGGTGTAATACTGATGGAACTGATTTCAGGAAGGAAAGCACTTGATGAAACACTACCTGAGGACAGCATGCACCTTGTGACGTGGTTCCGCAGAATGCACTTGAACAAAGAATCCTTCCGCAAAGCCATCGATCCCACAATAGACCTCAATGAGGAGACACTTGCCAGTATAAGCACAGTAGCCGAGTTAGCTGGCCACTGCTGCGCAAGAGAGCCATACCAAAGGCCTGATATGGGTCATGCTGTCAATGTCCTCTCCTCTCTAGTTGAGCTCTGGAAACCATCTGATCAAAGCTCTGAAGACATATATGGCATTGATTTTGATATGTCACTTCCACAAGTGCTTAAGAAATGGCAGGCTTATGAAGGAAGTGATATGGAGTCATCTTCTTCATCACTTTTGCCTAGCCTAGACAATACACAGACCAGCATACCGACACGCCCCTATGGTTTTGCTGAGTCTTTCACCTCAGCCGATGGGAGATAA 2862 0.4382 MKEKTHKGPYNLCLIITGFCSFCSWFLFVNSQASTDAPAMLALRESLQVPDTLGWTGPDPCKWNHVGCSNDKRITRIQIGRQSLKGTLTPSLQNLTQLERFEVQDNSIGGPVPSLKGLSSLQVVLLTGNQFSYFPSDFFDGMSALQSIEIDKNPFSPWEIPESVKNATALQNFSANSANITGKIPDFFSPDVFPGLTNLHLSFNSLTGGLPQSLAGSQIESLWVNGQYSGEKLTGDIDVIQNMTFLKQLWLHSNAFSGPLPDFSGLKELQDLSLRDNMLTGPVPSSLMGLKSLKVVNLTNNLLQGPVPVFGPDVAVDMNEDSNRFCLPTPGNCDPRVNTLLSIVKSMGYPQKLADDWKGNDPCNNWFGLTCSGGNIVVVNFQKMGLSGTISPDFVSLKSLQRLILSNNNLTGTIPVEIASLPNLAELDVSNNRLYGKVPSFKNGVNLHTQGNVDIGKERPSSSGSSPLSPGSSTRGSDEGNGGNSGDVGKKSSSLVGVIVFSVIGGVFVVGLIGFLIFCTFKMKQKRLSRVQSPNAMVIHPRHSGSDNESVKITVAGSSVSVGAISEAQTVPSSEAGDIQMVEAGNMVISIQVLRSVTNNFSEKNILGRGGFGTVYKGELHDGTQIAVKRMESGVIAGKGLAEFKSEIAVLTKVRHRHLVALLGYCLDGNERLLVYEYMPQGTLSSHIFDWPEEGRNPMEWNRRLTVALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDGKGSFETRLAGTFGYLAPEYATTGRVTTKVDVYSFGVILMELISGRKALDETLPEDSMHLVTWFRRMHLNKESFRKAIDPTIDLNEETLASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQSSEDIYGIDFDMSLPQVLKKWQAYEGSDMESSSSSLLPSLDNTQTSIPTRPYGFAESFTSADGR* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00618 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Pte8g00618 953 SMART serkin_6 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00618 953 PANTHER OSJNBA0070M12.3 PROTEIN 21 953 - -
Pte8g00618 953 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Pte8g00618 953 Pfam Leucine rich repeat N-terminal domain 337 372 IPR013210 -
Pte8g00618 953 Gene3D Ribonuclease Inhibitor 335 459 IPR032675 -
Pte8g00618 953 MobiDBLite consensus disorder prediction 918 953 - -
Pte8g00618 953 FunFam Receptor-like kinase TMK4 34 331 - -
Pte8g00618 953 MobiDBLite consensus disorder prediction 918 942 - -
Pte8g00618 953 Pfam Protein kinase domain 602 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00618 953 SMART LRR_typ_2 266 289 IPR003591 -
Pte8g00618 953 SMART LRR_typ_2 118 141 IPR003591 -
Pte8g00618 953 SMART LRR_typ_2 421 448 IPR003591 -
Pte8g00618 953 SMART LRR_typ_2 397 420 IPR003591 -
Pte8g00618 953 SMART LRR_typ_2 193 216 IPR003591 -
Pte8g00618 953 FunFam receptor protein kinase TMK1 679 896 - -
Pte8g00618 953 Gene3D Ribonuclease Inhibitor 33 333 IPR032675 -
Pte8g00618 953 FunFam receptor protein kinase TMK1 563 678 - -
Pte8g00618 953 CDD STKc_IRAK 607 880 - -
Pte8g00618 953 Pfam Leucine rich repeat 394 434 IPR001611 GO:0005515
Pte8g00618 953 Gene3D Transferase(Phosphotransferase) domain 1 679 899 - -
Pte8g00618 953 FunFam Leucine-rich repeat receptor-like kinase 335 458 - -
Pte8g00618 953 SUPERFAMILY L domain-like 68 448 - -
Pte8g00618 953 Gene3D Phosphorylase Kinase; domain 1 561 678 - -
Pte8g00618 953 MobiDBLite consensus disorder prediction 452 488 - -
Pte8g00618 953 ProSitePatterns Protein kinases ATP-binding region signature. 607 639 IPR017441 GO:0005524
Pte8g00618 953 ProSiteProfiles Protein kinase domain profile. 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00618 953 SUPERFAMILY Protein kinase-like (PK-like) 589 896 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00618 Pte-Chr8 28745611 28749530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00618 84 883 Receptor kinase-like Gene Family AT5G07280 30.984 1.77e-79 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pte8g00618 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00618 K00924 - qsa:O6P43_014259 1447.95