Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00613 ATGACTTCGAAAGAATTGAACGAGGAGCCGTATGAGAGTGGCAGTAAGGGTGACTTATCTGTCAACTTTTCCGGTATCAACCCCAAAAAACCAAACTCTGCCTTACAAAAAGTTGCCAGAGTACGCTTAACCTCTGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAGCATTCTGTAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCCGGTGTGAGATATCACATTGTTCGAGGAACCCCAGATGCTGTCGAAGTAAAGGATCGTCAACAAGGGCGTTATAGTGCATTGTAG 315 0.4317 MTSKELNEEPYESGSKGDLSVNFSGINPKKPNSALQKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTPDAVEVKDRQQGRYSAL* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00613 104 Gene3D - 2 103 IPR012340 -
Pte8g00613 104 MobiDBLite consensus disorder prediction 17 31 - -
Pte8g00613 104 MobiDBLite consensus disorder prediction 1 31 - -
Pte8g00613 104 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 23 101 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pte8g00613 104 PRINTS Ribosomal protein S12 signature 80 96 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pte8g00613 104 PRINTS Ribosomal protein S12 signature 28 43 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pte8g00613 104 PRINTS Ribosomal protein S12 signature 63 80 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pte8g00613 104 PRINTS Ribosomal protein S12 signature 44 63 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pte8g00613 104 SUPERFAMILY Nucleic acid-binding proteins 21 100 IPR012340 -
Pte8g00613 104 CDD Ribosomal_S12 28 96 IPR005679 GO:0003735|GO:0006412|GO:0015935
Pte8g00613 104 Pfam Ribosomal protein S12/S23 19 98 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pte8g00613 104 NCBIfam 30S ribosomal protein S12 16 100 IPR005679 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00613 Pte-Chr8 28720423 28720764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00613 25 85 Cytoplasmic Ribosomal Protein Gene Family AT3G09680 43.478 4.35e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00613 K02950 - soe:130461791 168.703