Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00600 ATGCCCTTGGAAGCTGGGATTTTCATTGAGTCCACTTCATCAACCGCTCCAGTTCCTGATCTTTCTCTTCACATCAGTCCTCCCAACAACAACAACCCTACTTCTGTATCTGATCGAAGTTTTTGTGTTTCAGCTCAGCAAGGTAACAGACAAAGTTCAATTACCATTGGGAATAGTATTGTCTCTCAAGCTCAGACTGAGCTCCCTCTAGGGAGGAGTGAGAGCACTCTTGCAGCTTCTGCAGCTGTGTTTCAGTCTCAAAGTCAGTACCATCGTCTTCATCACTCAAACAACGGTGGTAGTAATCACTCGGATCAACTATCATCGTCGTCACCAGTATCTGAGAACCTCTTGATACCGATTAAAGGTATTCCGGTCTATCAAAACCGATCATTTCCCTTCTTGCCTATGGACCTAATTAGAGACAACAACATGGAAGCTAAGGTGCGCTTGTATCATCATATGTCTGTACCGTATCGTCCTTTGTCGTCGTCTTGTTCCTCCGTATGCTCACCTGCATCGTCACCTTCAGCTCCTCCGCGGTACTTCCCAGCCAGTTTGGATCCCACGCCGATTTTAAACACGGATTCATATAATGTGTCCCCTACTTGTTATAGGCCATCATCTGGGGCAGCAGCAGCAGAAGCAGAAGCAAGGTTTAAAGGCTTTCCTACCTATGCTATCAAATCTCAGCAATTGCACCATCGCAATCAGTGTGGGGCTGGTTCCCCTGAGATCCCATCATCTGGGTTGACGAGATCAAGGTTTTCTTCTAAATTGGCTACTAAGAAAAGCATGAGAGCACCAAGAATGCGGTGGACCAGTACACTCCATGCTCGTTTTGTTCATGCTGTTGAGCTTCTTGGTGGTCATGAAAGAGCCACACCAAAGTCAGTACTAGAGTTCATGGATGTGAAGGATCTTACACTTGCCCATGTCAAAAGCCATTTACAGATGTATAGAACTGTGAAGACTACTGATAAACCTGCAGCTTCTTCAGGCCATTCAGATGGATCTGGAGAAGATGATGTCTTTCGAATAGGAATTACGAGTGATGACCGCCGTATGCTTCAACAGTGTAATGATCATAGAGGATCTTCTGATCGTTTGTTGCGAAGTGACATGTTGGCCGACACCTCCAATCCTACCTCTACGCTCTGGAGTAACTCCTCAAGTAGCAGAGACGAGTGGCCACGGACAAACTCTAATGATGGAGATGATCTTAGACAAGTACTTATCTTCCCAACACAGCAGATCATATCTGAAGGGAACCAAATACAGGAACATCACTCAGTTCATCGACCTAGTCACTTGGCAGGACCTAACTCGGATTCTGAAAACCCAGATTTGGAGTTTACATTAGGTAGACCAGATTGGTAG 1380 0.4558 MPLEAGIFIESTSSTAPVPDLSLHISPPNNNNPTSVSDRSFCVSAQQGNRQSSITIGNSIVSQAQTELPLGRSESTLAASAAVFQSQSQYHRLHHSNNGGSNHSDQLSSSSPVSENLLIPIKGIPVYQNRSFPFLPMDLIRDNNMEAKVRLYHHMSVPYRPLSSSCSSVCSPASSPSAPPRYFPASLDPTPILNTDSYNVSPTCYRPSSGAAAAEAEARFKGFPTYAIKSQQLHHRNQCGAGSPEIPSSGLTRSRFSSKLATKKSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLEFMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDVFRIGITSDDRRMLQQCNDHRGSSDRLLRSDMLADTSNPTSTLWSNSSSSRDEWPRTNSNDGDDLRQVLIFPTQQIISEGNQIQEHHSVHRPSHLAGPNSDSENPDLEFTLGRPDW* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00600 459 Gene3D - 268 325 - -
Pte8g00600 459 FunFam Myb family transcription factor 267 325 - -
Pte8g00600 459 MobiDBLite consensus disorder prediction 325 345 - -
Pte8g00600 459 MobiDBLite consensus disorder prediction 379 409 - -
Pte8g00600 459 MobiDBLite consensus disorder prediction 379 398 - -
Pte8g00600 459 MobiDBLite consensus disorder prediction 426 459 - -
Pte8g00600 459 SUPERFAMILY Homeodomain-like 266 322 IPR009057 -
Pte8g00600 459 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 19 459 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pte8g00600 459 MobiDBLite consensus disorder prediction 92 111 - -
Pte8g00600 459 NCBIfam myb-like DNA-binding domain, SHAQKYF class 269 322 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00600 Pte-Chr8 28533368 28537057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00600 1 459 G2-like Transcription Factor Family AT5G16560 38.095 9.88e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte8g00600 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00600 - - lja:Lj0g3v0089499.2 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00600 8 28533368 28537057 Pte8g00600 8 28533368 28537057 RCT