Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00593 ATGGTGTCTGCGTCGATGGCTATTCAGGGTCAGACTGGAGGTACTGGATCACACAGTGATTCTTCAGCAGGAAATGGGGTATCTCTTAGTTCTGGACTTCATTCTTTGTCTGGCATTCAACTAATGGACCAGTTCTGTTCTGCCAATGACTATGCTCCTAAGGTGAGGAAACCATATACCATCACTAAACAGAGAGAGAGATGGACCGAGGAAGAACATAAGAAGTTCCTCGAAGCTTTAAAGTTGTATGGTCGGATCTGGCGAAAAATAGAAGAACATGTTGGCACAAAGACTGCAGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTCTCTAAGATTGTTCGTGACTCAAATGGGGGCAATCCTATTGAATCTGTTGAGATTCCGCCGCCAAGACCAAAGAGAAAACCGATACATCCTTACCCCCGGAAGGTTGTACAAACTACCAATGTGAAAACCCTTAAACTAAAAAGGCCAATTAGGTTTAGTTCTCCTAATGATGCCATTTGTGATCATGAACAGTCGCCAACATCGGTTTTATCAGCTTTTGGTTCAGAAACATGTGGTTCCATAGAGTCGGATACACTAAATGGCAGCTTATCCCCATTGTCAAATTTTACTGCTAATAAAGCTGGCATAATGTTTCAAGAAGGCGATCTGGCACCCACACAGTTTACCATCTCCACAGCTAAGCCACCTATGATGAACTCCCCATTCCTTCCTGCAAGCTGTGTCAATCCTGTAGAAGGGACAGCAGGCACCAGAATTCTCAAGCTTTTTGGAAGGACTGTAATGGTGGCAGATTCCTGCCATCCAGCCCTCCCCACCATGGTTACAAGCAGATCGTCTACTCCAGAGATTCTTGAACAAGTATACGCTCAATCATCAATCTTGAAGTTCACCAAGTTGGAAGCTTCACCTGATAATGCACAATGCCGTGAGAATGGCATGAGAGAGGAACCAAATAATACTGCATACCACATGCAACATCGAAGTGATGATTCCAATTTGGAAGAAGCTCGTGCTGCTGCTTCTGTCTTATGTTCCTTCATGCCAAGCCAAAAGCAGGAGCTGGATGAGAAACAGTTGGATTCATGTGCTGGAGTTCAAACTAGAGAGCTTCAGAACGAAACATCCTGGACAGGTTCAAGCGCTGCATTCGTAAACAGCAGGGAAAAGAACGAATCATCGGAGTCAGAGACAGAAAGCGATAAAGGGTCCAATATTAAGGCAAGGGACTGCTCAGTCATCTCTGAATTAAGAACTCAATGTGAAACATCCAGGGGTTTTGTGCCGTACAAAAGATGTGTTGCAGAAAGACATGGTTTCTGCTCAATGATGAGCAGTGAGGAGAGGCAAGAGCAACTGTTCCGTCTATCCTTATAG 1386 0.4437 MVSASMAIQGQTGGTGSHSDSSAGNGVSLSSGLHSLSGIQLMDQFCSANDYAPKVRKPYTITKQRERWTEEEHKKFLEALKLYGRIWRKIEEHVGTKTAVQIRSHAQKFFSKIVRDSNGGNPIESVEIPPPRPKRKPIHPYPRKVVQTTNVKTLKLKRPIRFSSPNDAICDHEQSPTSVLSAFGSETCGSIESDTLNGSLSPLSNFTANKAGIMFQEGDLAPTQFTISTAKPPMMNSPFLPASCVNPVEGTAGTRILKLFGRTVMVADSCHPALPTMVTSRSSTPEILEQVYAQSSILKFTKLEASPDNAQCRENGMREEPNNTAYHMQHRSDDSNLEEARAAASVLCSFMPSQKQELDEKQLDSCAGVQTRELQNETSWTGSSAAFVNSREKNESSESETESDKGSNIKARDCSVISELRTQCETSRGFVPYKRCVAERHGFCSMMSSEERQEQLFRLSL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00593 461 MobiDBLite consensus disorder prediction 393 408 - -
Pte8g00593 461 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Pte8g00593 461 MobiDBLite consensus disorder prediction 377 392 - -
Pte8g00593 461 FunFam protein REVEILLE 6 isoform X1 67 115 - -
Pte8g00593 461 MobiDBLite consensus disorder prediction 121 140 - -
Pte8g00593 461 Gene3D - 67 114 - -
Pte8g00593 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Pte8g00593 461 SMART sant 64 112 IPR001005 -
Pte8g00593 461 MobiDBLite consensus disorder prediction 1 26 - -
Pte8g00593 461 CDD SANT 67 110 IPR001005 -
Pte8g00593 461 ProSiteProfiles SANT domain profile. 63 114 IPR017884 -
Pte8g00593 461 SUPERFAMILY Homeodomain-like 59 113 IPR009057 -
Pte8g00593 461 MobiDBLite consensus disorder prediction 377 408 - -
Pte8g00593 461 NCBIfam myb-like DNA-binding domain, SHAQKYF class 63 112 IPR006447 GO:0003677
Pte8g00593 461 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Pte8g00593 461 PANTHER SWI/SNF COMPLEX-RELATED 25 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00593 Pte-Chr8 28284927 28288323 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte8g00593 Myb_DNA-binding 9.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00593 - - qsu:111984846 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00593 8 28284927 28288323 Pte8g00593 8 28284927 28288323 RCT