Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00592 ATGCCACCCCTTGTATTTAATCCTCTCTTCATTCTCTCTCTCTTCTTCTGCACAGCCACCTCTCACTTCTCCTCCTCCTCCTCCTCCTCCACTTCTCCTTCATTCTCAGAATGGAGACCTGCACGCGCAACTTACTACGCCGCTGCCGATCCCCGAGACGCTGTGGGTGGCGCGTGCGGTTACGGTGACTTAGTGAAGGCTGGTTATGGCATGGCCACTGTTGGTCTCAGTGAAGTTTTGTTCGAAAGAGGTCAGATCTGCGGTGCGTGTTTTGAACTGAGGTGTGTGGATGATCTGCGATGGTGCATTCCTGGAACCTCCATTATTGTCACTGCGACTAACTTCTGTGCTCCTAACTATGCCTTCACTTCTGACGGTGGTGGACGCTGTAACCCTCCGAACAAGCATTTTGTGCTTCCGATTGAAGCTTTTGAGAAGATTGCTATTTGGAAAGCTGGTAATATGCCGGTTCAGTATAGAAGGATTAAATGCAGAAAGGAAGGAGGAATCCGATTTACAGTAACTGGGTCAAGTATCTTTATTTCTGTGTTGATAAGCAATGTAGCAGTCAGCGGAGATGTAGTTGCAGTGAAAATCAAAGGTTCAAGAACCGGTTGGCTTTCAATGGGTCGCAATTGGGGACAAAATTGGCATGTAAATGCTGATTTGACAAATCAACCTCTTTCATTTGAGGTCACTGGCAGTGATGGGCTTACAATTACGTCTTATAATGTTGCTCCCAAGAATTGGAAATTTGGACAGACATATGAAGGCAAGCAGTTTGAGTCATAG 792 0.4646 MPPLVFNPLFILSLFFCTATSHFSSSSSSSTSPSFSEWRPARATYYAAADPRDAVGGACGYGDLVKAGYGMATVGLSEVLFERGQICGACFELRCVDDLRWCIPGTSIIVTATNFCAPNYAFTSDGGGRCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRFTVTGSSIFISVLISNVAVSGDVVAVKIKGSRTGWLSMGRNWGQNWHVNADLTNQPLSFEVTGSDGLTITSYNVAPKNWKFGQTYEGKQFES* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00592 263 Pfam Expansin C-terminal domain 170 247 IPR007117 -
Pte8g00592 263 Gene3D - 21 165 IPR036908 -
Pte8g00592 263 PRINTS Expansin signature 127 144 IPR002963 GO:0009664
Pte8g00592 263 PRINTS Expansin signature 244 260 IPR002963 GO:0009664
Pte8g00592 263 PRINTS Expansin signature 68 82 IPR002963 GO:0009664
Pte8g00592 263 PRINTS Expansin signature 108 118 IPR002963 GO:0009664
Pte8g00592 263 PRINTS Expansin signature 95 106 IPR002963 GO:0009664
Pte8g00592 263 PRINTS Expansin signature 144 157 IPR002963 GO:0009664
Pte8g00592 263 PRINTS Expansin signature 180 201 IPR002963 GO:0009664
Pte8g00592 263 PRINTS Expansin signature 215 236 IPR002963 GO:0009664
Pte8g00592 263 PRINTS Expansin signature 168 180 IPR002963 GO:0009664
Pte8g00592 263 Gene3D - 167 261 IPR036749 -
Pte8g00592 263 CDD DPBB_EXPA_N 37 164 - -
Pte8g00592 263 PANTHER EXPANSIN-A15 14 261 IPR002963 GO:0009664
Pte8g00592 263 SMART dpbb_1 73 159 IPR007112 -
Pte8g00592 263 PRINTS Expansin/Lol pI family signature 152 168 IPR007118 GO:0005576
Pte8g00592 263 PRINTS Expansin/Lol pI family signature 77 95 IPR007118 GO:0005576
Pte8g00592 263 PRINTS Expansin/Lol pI family signature 206 220 IPR007118 GO:0005576
Pte8g00592 263 PRINTS Expansin/Lol pI family signature 55 73 IPR007118 GO:0005576
Pte8g00592 263 PRINTS Expansin/Lol pI family signature 244 258 IPR007118 GO:0005576
Pte8g00592 263 PRINTS Expansin/Lol pI family signature 37 52 IPR007118 GO:0005576
Pte8g00592 263 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 56 169 IPR007112 -
Pte8g00592 263 SUPERFAMILY PHL pollen allergen 166 258 IPR036749 -
Pte8g00592 263 SUPERFAMILY Barwin-like endoglucanases 37 187 IPR036908 -
Pte8g00592 263 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 179 258 IPR007117 -
Pte8g00592 263 Pfam Lytic transglycolase 74 159 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00592 Pte-Chr8 28269384 28272165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00592 37 263 Expansin Gene Family AT3G03220 85.903 3.16e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00592 - - csav:115705382 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00592 8 28269384 28272165 Pte8g00592 8 28269384 28272165 RCT