Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00556 ATGGAGGTTGATGATGTAATGGAGTATATTGATCTAGAAGTTGATAAGAACATTGAGGGTAAATCTGATTCGATAATTGAGGGTGATTCGGATGCAATAGTTCAGTGCGAGTCTGATATGGTCAATGAGGCTGGTGTTTCCTCTCCTAGTAGGGTGCAAAACGTTGACATATGTGTTGGTATGGAATTTCCCATGTTTTCAGAGATACAAAACCTATATGCGGAGTATGGCAAGTTGAAAGGATTTCAAATACGGGTGCGTAATTCTCGAGAAAAGTTTATACAATTTGTGTGTTCTAGAGAAGGCGTCCCATTGAAAAGCAATAAGGCGGACAAAATAGGAAATATCACTAAGATTGACCCCAATAAATATAGTAAGTCATGTAAACAAGGTTGTCGAGCAAGTCTGCATTGTGTATTGGATGTTAGGAGTAATGTGTGGAGGATATCAAAATTTGATGATACTCACAATCATGGGATGGTGACTCCCAAGAGCCGCAAATTTCTTAGGTCTCATAAGAAATTTACTAATGCTGCCAAAAGTCTGTCTCAAGTTTTTGATGGGGAAGGTATTCCTGTTGGGAAGGTGGTAAATGTTTTAAATCCAAATATAGACGAAGCTGAGTTCACAAGGAAAGATTGTTATAACTACATGACTAGTTTACGACAACGAGTGCTTGAAAAGGGTGATGCACAAGCAGTTCATGAATTTTGCACTAGACAACAAGCATTGAACTCAGATTTCAGGTTTTCCATTCAACTTGACGAGGATGACAGAATGTTAAATTTTTTTTGGGTTGATGCTAGATCACGGGCCGCATATCAGACATTTGGAGATGTAATTAGTTTTGATACGACCTATAAGACGGATAAATATAGCATGCCATTTGCACCATTTGTGGGACTTTACAATCATATGCATACGATTTTGTTTGGATGTGCTTTACTGCAGGATGAGACTGAGACATCATTTATATGGCTTTTCAACACTTGGTTGGAAGCCATGGATGGCAAGGTACCCACTGCTGTTGTAACTGATCAGGATATGGCCATTATGAATGTTGTGGCAAAGGTGTTCCCATCTTCAAGACAGTTGTAG 1098 0.3898 MEVDDVMEYIDLEVDKNIEGKSDSIIEGDSDAIVQCESDMVNEAGVSSPSRVQNVDICVGMEFPMFSEIQNLYAEYGKLKGFQIRVRNSREKFIQFVCSREGVPLKSNKADKIGNITKIDPNKYSKSCKQGCRASLHCVLDVRSNVWRISKFDDTHNHGMVTPKSRKFLRSHKKFTNAAKSLSQVFDGEGIPVGKVVNVLNPNIDEAEFTRKDCYNYMTSLRQRVLEKGDAQAVHEFCTRQQALNSDFRFSIQLDEDDRMLNFFWVDARSRAAYQTFGDVISFDTTYKTDKYSMPFAPFVGLYNHMHTILFGCALLQDETETSFIWLFNTWLEAMDGKVPTAVVTDQDMAIMNVVAKVFPSSRQL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00556 365 Pfam MULE transposase domain 280 364 IPR018289 -
Pte8g00556 365 Pfam FAR1 DNA-binding domain 72 161 IPR004330 -
Pte8g00556 365 PANTHER OS01G0519700 PROTEIN 44 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00556 Pte-Chr8 27204833 27205930 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pte8g00556 FAR1 6.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00556 - - vvo:131633311 315.464