Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00553 ATGGCGGGTGACCAGGAGAAGAACGTGAGGTTTTATCCTCCAGACGAGCTCCGGTGTACCCGGAATGACGGCAAGACGTGGCGTTGCAGCCATTGGAGGATTCAGAATCAAAGTTTCTGTGAGGATCATTACTTGAAAAGCAAGGGCACGACTTTGCAGAATAAGAAAAATCTCAATGACGGTGAAAGCATGAGTGGAGCCCTTGTTCTTTTTAGTACCGGCCAGCGGAGCAAGAGAGCGAAACCCAAAAAGGGTTCAAGGTTGAATTCTTTTGGTGGAAGGAATGATACCCATGAGGCCCAAGAGACCGGTGGGATAGAAGATATTAAACTTTTGGATCGAAAGAGGGATTTGACTAGTAACAATGTTGGCTGCAGTAATAGTAGAGGTCGAAGCAACAGTACCCATAAGGGCCAAGACATGAGTGAGGTAGAAGAGGATGAAGTTTTGCCTCGAAAGAAGGTTAGGACTCTTAACAGTTTTAGCTGTAGTGCTAGTAGAGGTCGAAAGAATAATCAGAAGGCTCAAGAGATAAGTGAGAGAGAAGAAGATGAGGTTTTGCCTCAAAAGAAGGATAGGACTAGTAAAAACGTTAGTTCTAGTACTAGTAGCGGTTGTGATAATGCCCATACAGGCAGTGATAGGGTTAGTGGGCGCATGTCTTTGAATGGAGGGATCTTGTTTAACTGTAAGAATGGGAAGGGTGTGAAGAGGGGAAGAGGAGCATTTGAAGATGAGGCTCTGGATGAGGGAGAGATTATCGAGAAGAAAACTAAGAGTGTGAAAATTGGAGACACGGTTGGGGAAGAGAGAAAATGTAGCAAGGAGGGGTTCATAGTGTATAAGAGAAGGAAAGTTAAACAAGCGCATGCAGCAGTATCCGAGGTTTATTCCGAGGATAAAGATAAAAAGGATGACAAATTGTTGTCAGATGGGAAAGCTAGAAGTTTGGATAGGAGAAGGAGAATGATCCAATTGCAGGAAGAGCAAGGTGAAGAGAATAAAGAGGGTTCTGTAAAACCAGGATCTAAACGTGATGCGACTGATAGTCGGAGTAGGAAAAAGTCTAATTCTGCTTACAATAGAGAAGAAGATGATTGCTTCTGTTGTCATCAATGCCAGAGGAGTGACAAGGATGTTGTACGATGCCAACTAGGCAACTGTTCAAAACGATTCTGTGGACCTTGTCTCAAGAGATGGTATCCCCGATTGTCGGAGGAAGAGATAGCTGAATCTTGCCCTGTTTGCCGTAAAAATTGCAACTGCAAGGCCTGTTTGCGGAGAAAAGATGTGCTCATGGATTCTGAGAATTCTGGAATGCCATCTGAGACAAAAAAAAAGATTCAATATTTGAAGTATTTGATACAAGTTCTGTATCCTTTTTTGGAAAAGTTTGATTATGAACAGCAGTTGGAAAAGGAAATGGAAGCTAAAATTCAAGGGATAACAATTTCAGAATTAAAGGTAAAGCGGGCTGGTATTTACAATGACGAGCGTGTTTATTGCAATAACTGCAGCACATCAATCATTGATTTTCATCGGAACTGTCCCAAATGTTCTTATGATCTTTGCCTCTATTGTTGCCGGGAAATCCGCCAGAACCTCTTGCATGATGTTAGAGATGAGATGTTTGAGGGCTGTAATGACAACAAAGAAATTCATCTGCTTCAGGAAGATAAGACAGCATGTCTGCAGTCAAATTGTGAGAAAGATGTGAAAGAAAAATATACACTGGAACCAGGAAAAAATGGTGCCATCCCCTGTCCTCCTAGAGAAAAGGGTGGTTGTGAACATAAATATTTGAAACTCAAGTCTATATTTCCTGACAATGAGATTTCCAAGTTAAAAAAGCAAGTTGAAACGTTACTTGAATTGCAATTAAGGGACCTTCCAGGAGTTTCATTTCCTCGCACTTTGTGTCACGATGCTGATGGCGAAATTGATGTCAATAACGACAATGTGCGTAAAGCTGCCTCCCGTGAAGACTCCAGGGACAACTACTTATATTGCCCTTTGGGCAGAGAGATTAAAGAGGGTGATTTGGGACATTTTCAAAAACATTGGTTGAAGGGAGAGCCAGTAGTTGTAAGAAATGTTCTCGAATTAACCCCAGGATTAAGTTGGGAGCCAATGGTTATGTGGCGTGCATTGCGGGAGATAACCTACACAGGTGAATCTCAGTTGAAAGTGACTGCAATAGATTGTCTTGACTGGTGTGAGGTCGAGATAAATATCCATCAGTTTTTCAAGGGGTACAGTGAGGGTCGTTCTCACGTAAGCGGTTGGCCTGAGATGCTCAAGCTTAAGGATTGGCCACCATCTAATTTGTTTGAGGAGCGGCTACCTCGTCATGGTGCCGAGTTTATACGTGCTTTGCCCTACAAGGAATACACTCATCCTCGCTCTGGAATTCTTAACGTTGCTGCAAAGTTGCCAGAGGATTCTCTGAAGCCTGACATGGGACCAAAAACTTATGTAGCGTATGGTTATGCAGAAGAGCTTGTAAATGGAGATTCTGTGACCAAGCTTCATTGTGACATGTCTGATGCGGTAAATATTTTGACTCATACTGCTGAAGTAGAACCTACCTCTTATGACATTGCCAGAATAAGGAATTTGAAGAAGGATTTTGCCGCTAAAGATCAGAGCGAACTATTTGGTATCCTTCAGAGTATTGGTTCAGTATCAGAGAAGTGCTCATCAAAATTGGAAGTAGAGCCTAATCCACCAAAGGATGCTTCGAGCTCTGAGGGTTTTACCACCATTGAAGTGTCCACGTTGGAAAATGATGGCATTAGTGCAGAAACTCAAAATGCTATGCCCTTGGATGTTGCATCTAATTCCTCTCACAATAGCAAGTCTCTGGACTTGTCTGACAATAATCACAACAGTAATTGTTTAAGGGAATTGCCAGCAGTTCATGAGTCAACTCCTCTGGTTAGCTTGAATGTAAAGGAAGACTTCAAAACTTCCACTGCTGATAATGAATCTGATGCGCTGGGAGTAGCACAAAAGAAGGAAGGATGTGGCAATACTATGGCTTTTAGGAAGAAAGATGCTGAGATGAAAATTGTTGATTATTCATCTTCCGATAGAGAATGTGAAGAAGAGTGTGATGATGGTCGTGGAGTAGATAAAAAATTTGGTCTTCCATCAGAAAAGAAAGTCAACTTTGTTACAATGCAACCCACAAAACCCATCGTGAGGAAAAGCAATGCTAAAAGAAATACCAATGCGAAGAAGCAAGAATTGTGTGCTTCCGAGTTGCAGGCAAAAGGGCAAGGTCAAACGGAAAAAGACAGAGAGGTGAAGGTGTCTGATGCTGATTTATCTATTGTGCTTAGTTCGAGGAGTGATGTGGATAACAATGATAGAATTGTAACTCCAGCTCTTAGTTCTATATCTGATCTGGCTGGACCTGAAGCGAGTGAGGGAAGTGCAGTCTGGGATATTTTTCGTAGGCAGGATGTTCCCAAACTTGAGGAGTACCTTAAAAACCATTGCAGGGAATTTAGGCATATTCATTTGGATCCAGTAAAGCAGGTTGCGCACCCCATTCATGATCAAGTATTCTACCTGTCGTCTTATCACAAAAAGAAGCTCAAAGAAGAGTTTGGAGTTGAACCATGGACATTTGTCCAAAAACTTGGTGAGGCAGTATTCATACCTGCTGGATGTCCCCACCAAGTGAGGAATTTGAAGTCATGTATGAAGGTTGCTCTTGACTTTGTCTCTCCTGAGAATGTTCAAGAGTGCATTCGGTTGACAGAGGAATTTCGCAGTCTTCCCCATAATCACAGAGCAAAGGAGGATAAACTTGGGGTGAAGAAAATGGCTTTTTATGCCTTAGAATCTGCTGCAAGGGAATTGGAGAATCTGACAGGTCTAAAATATTGA 3897 0.4221 MAGDQEKNVRFYPPDELRCTRNDGKTWRCSHWRIQNQSFCEDHYLKSKGTTLQNKKNLNDGESMSGALVLFSTGQRSKRAKPKKGSRLNSFGGRNDTHEAQETGGIEDIKLLDRKRDLTSNNVGCSNSRGRSNSTHKGQDMSEVEEDEVLPRKKVRTLNSFSCSASRGRKNNQKAQEISEREEDEVLPQKKDRTSKNVSSSTSSGCDNAHTGSDRVSGRMSLNGGILFNCKNGKGVKRGRGAFEDEALDEGEIIEKKTKSVKIGDTVGEERKCSKEGFIVYKRRKVKQAHAAVSEVYSEDKDKKDDKLLSDGKARSLDRRRRMIQLQEEQGEENKEGSVKPGSKRDATDSRSRKKSNSAYNREEDDCFCCHQCQRSDKDVVRCQLGNCSKRFCGPCLKRWYPRLSEEEIAESCPVCRKNCNCKACLRRKDVLMDSENSGMPSETKKKIQYLKYLIQVLYPFLEKFDYEQQLEKEMEAKIQGITISELKVKRAGIYNDERVYCNNCSTSIIDFHRNCPKCSYDLCLYCCREIRQNLLHDVRDEMFEGCNDNKEIHLLQEDKTACLQSNCEKDVKEKYTLEPGKNGAIPCPPREKGGCEHKYLKLKSIFPDNEISKLKKQVETLLELQLRDLPGVSFPRTLCHDADGEIDVNNDNVRKAASREDSRDNYLYCPLGREIKEGDLGHFQKHWLKGEPVVVRNVLELTPGLSWEPMVMWRALREITYTGESQLKVTAIDCLDWCEVEINIHQFFKGYSEGRSHVSGWPEMLKLKDWPPSNLFEERLPRHGAEFIRALPYKEYTHPRSGILNVAAKLPEDSLKPDMGPKTYVAYGYAEELVNGDSVTKLHCDMSDAVNILTHTAEVEPTSYDIARIRNLKKDFAAKDQSELFGILQSIGSVSEKCSSKLEVEPNPPKDASSSEGFTTIEVSTLENDGISAETQNAMPLDVASNSSHNSKSLDLSDNNHNSNCLRELPAVHESTPLVSLNVKEDFKTSTADNESDALGVAQKKEGCGNTMAFRKKDAEMKIVDYSSSDRECEEECDDGRGVDKKFGLPSEKKVNFVTMQPTKPIVRKSNAKRNTNAKKQELCASELQAKGQGQTEKDREVKVSDADLSIVLSSRSDVDNNDRIVTPALSSISDLAGPEASEGSAVWDIFRRQDVPKLEEYLKNHCREFRHIHLDPVKQVAHPIHDQVFYLSSYHKKKLKEEFGVEPWTFVQKLGEAVFIPAGCPHQVRNLKSCMKVALDFVSPENVQECIRLTEEFRSLPHNHRAKEDKLGVKKMAFYALESAARELENLTGLKY* 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00553 1298 Pfam WRC 14 49 IPR014977 -
Pte8g00553 1298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 342 476 IPR013083 -
Pte8g00553 1298 Gene3D Cupin 1054 1269 - -
Pte8g00553 1298 ProSiteProfiles JmjC domain profile. 800 1260 IPR003347 -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 72 218 - -
Pte8g00553 1298 ProSiteProfiles Zinc finger RING-type profile. 370 417 IPR001841 -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 293 314 - -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 173 192 - -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 136 154 - -
Pte8g00553 1298 FunFam Transcription factor jumonji (JmjC) domain-containing protein 1075 1269 - -
Pte8g00553 1298 Pfam JmjC domain, hydroxylase 1145 1243 IPR003347 -
Pte8g00553 1298 SMART cupin_9 781 1260 IPR003347 -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 100 117 - -
Pte8g00553 1298 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 14 1294 IPR045109 GO:0032454|GO:0033169
Pte8g00553 1298 SUPERFAMILY Clavaminate synthase-like 683 1292 - -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 193 218 - -
Pte8g00553 1298 ProSiteProfiles WRC domain profile. 13 59 IPR014977 -
Pte8g00553 1298 Gene3D Cupin 665 912 - -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 326 357 - -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 157 172 - -
Pte8g00553 1298 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00553 Pte-Chr8 27128487 27136749 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pte8g00553 JmjC 2.4e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00553 K15601 - qsa:O6P43_020496 1053.51