Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00543 ATGGATGCTGACGTACTACGTTGGATTCTCGACTTCCTTGTCCGGAGTTCAATCCCAAATGCCCTATTGAAGAAAATCATTGCAGTAGTTCCAATTCCCGGTATCGATTCCTCGTTCGAGAAAGCCTTCCTTCTACGAATCATTCAAGCTGAGCTCTCGAAAGCCTCAGTTTCGGAGACCCTCTTGGAAATACTTGAAATGATTGAAGAGCTAGACAGGAACAATGGAATGGCAATCATGGATTCGATGAGAGCTGCGTACTGTGCTGTTGCCGTGGAGAGTACTGTCAAGTACTTTGCTGTCTGTCCGGAAAACAATGAAGAATGTGTGAAAGCGGTCACGAGGATCTGGAGGCGTAGGATGTCGTGCATGGAAGAGTCGGAGGGAAGGAGTGAGTTGATTGGTGAGGAGTTTAAGCAATGGAGGAATGAGATTGACGCTGTTGTTTCGGATTTAGATGCCCGTGAAAGGTTAGGAAATGTGAATACTCGTAAAGATGCTTCAAATAAGCTTCGAGCTTATTTGAAGGAAGCATGGGCAAATACGGGTCCCAGTTTTCTAGAAGCAATCGAGAGGTTGATGAAAGTGAAGAATTTGGCATTTCATGCTGTGGAGGGTGAAGTGGGTATGACTTGTGAGGCTAATTTGGATGAGGAATCAAGAGAGAATGTTGCAGGGAGGACAAGGAATACGCCAGACACAGATAGGTATTATGTTGGCGATAATGTAGTTGAAGTGGATGATGGCGCCAGAGTGAGACTGGATCAGGGTTGTAGTGCTGAAACTGGAACTGGGTTTAACAATGGCACAGTGAACGTGATTGATGCGCAAGGTACAGGTGATAATCAGACAGGTCAGCAAGTTGAAGATATGGATATCAATAAGACAAAGGGTTTTAGTGTGAGTGATCTTCCTGCTAATGTAGTGGCAGAAATTCAGAGGGGTAATCTGCTACACAAACAGAAACACACTGCATACCGCAAGCGTTGCAAAGGAATTAAAATCAGTATACCTGAGGAAGAGGAAGCAGATGAAGATTCAGGTTCGTCATGCAGCAATCATGATCTCTTGCCTAGTTCTGAAGTTAAAAAGGTCCGGGAAGCCCTTATATCCAGTTCCTTACAGCTGCAAGCTTTAGTGAAGGATCCTCTTCCTGATGCATTACGCATGTCAGAGTTTGCTCGAAGTGAATTGGAGAAAAGAAATATCAATGAAGAAGCACCTATTGGAAGTCAGAGAAATGTTCGTCCAGCCAGTCTCATGGAACGTAATAACACTGCTCATGTTTATGAGTGGGATGATTCAATCAATGAATCACCTAAAGGATCATCAAACTGTTCAAGTCAATTACATGCACCTAACTCAAATAAGAATAAAGTTTCTCCATTGAAGAAGTATGCATTTGAAAAAATTACCAAAAGAAGGAAAGTGAAGAAATGGACATTGATTGAGGAAGATGCATTAAGGGCGGGAGTACAGAAGTTCGGTGCAGGGAACTGGAAGCTTATCTTAAATAGTCATCGAGATATATTTGAGGAAAGAACAGAGGTTAAGCCAAATATTCTACTTTTCTTAACTCTTAAGGTTATGCAGAGTTCAAATTGTTTTGTTGAAACAAATTCATTGTTTCACAGGTTGATCTTAAGGATAAGTGGAGAAATATGA 1665 0.4204 MDADVLRWILDFLVRSSIPNALLKKIIAVVPIPGIDSSFEKAFLLRIIQAELSKASVSETLLEILEMIEELDRNNGMAIMDSMRAAYCAVAVESTVKYFAVCPENNEECVKAVTRIWRRRMSCMEESEGRSELIGEEFKQWRNEIDAVVSDLDARERLGNVNTRKDASNKLRAYLKEAWANTGPSFLEAIERLMKVKNLAFHAVEGEVGMTCEANLDEESRENVAGRTRNTPDTDRYYVGDNVVEVDDGARVRLDQGCSAETGTGFNNGTVNVIDAQGTGDNQTGQQVEDMDINKTKGFSVSDLPANVVAEIQRGNLLHKQKHTAYRKRCKGIKISIPEEEEADEDSGSSCSNHDLLPSSEVKKVREALISSSLQLQALVKDPLPDALRMSEFARSELEKRNINEEAPIGSQRNVRPASLMERNNTAHVYEWDDSINESPKGSSNCSSQLHAPNSNKNKVSPLKKYAFEKITKRRKVKKWTLIEEDALRAGVQKFGAGNWKLILNSHRDIFEERTEVKPNILLFLTLKVMQSSNCFVETNSLFHRLILRISGEI* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00543 554 Gene3D - 469 528 - -
Pte8g00543 554 PANTHER MYB TRANSCRIPTION FACTOR 1 517 - -
Pte8g00543 554 CDD SANT_TRF 478 517 - -
Pte8g00543 554 MobiDBLite consensus disorder prediction 437 456 - -
Pte8g00543 554 SUPERFAMILY Homeodomain-like 474 517 IPR009057 -
Pte8g00543 554 MobiDBLite consensus disorder prediction 434 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00543 Pte-Chr8 26817700 26822208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00543 443 517 Single Myb Histone (SMH) Gene Family AT1G15720 42.667 2.59e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00543 - K11111 qsa:O6P43_020440 377.481