Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00541 ATGCACCAAGATCCACCATTTTCTTCAAACTCTAATAAATTTAATTCAAGTTCTCTCAAACTCAATACCAACGTGAATTTGAATTTCAGCTCTTCTCACAGACCTCATTTGCCACCAACACCACCACTTGCCTTCGCAAATGCCAATGCCAATTCATCATCTCCTTCCGCTACTGCTTCTTCATCTTCTTCAATTTTCATCAGGAATGGTGATGGTGCTGGAAATGGGACCCTTGGCGGGACCCACTTAGACCAGAATCACCACCACCATCATAGGAGGGCCCACTCCGAGGTCAGCTTCAGATTGCCGGAAGATTTGATGGATCTGTCGCCGTCCAATCCGTTTAACGGTGGTGGGTCATCCACTGCCAGCCTTGAGGAGCTCGGATCAGAAGATGACCTGTTTTCTACTTACATTGACGTTGACAAGCTGGGAGGAGGAGACGGGTCGGCTACTGGTAGTGGCGGTGGAGCAAACGGGTCGCCTGATCAGAGTGGAAATGGCAATCCTAAAGACACTGTTGAGGGAGATAAGAGTTCGGATCTGAGTCCTACCACAAGTGGCAATGCGAGACCCAGACACCGGCATAGTTGCTCGGTTGACGGGTCGATCTCCAACAGTATGTTTGGTGAGATTATGGAGGCGAAGAAGGCAATGCCACCTGACAAGTTGGCTGAGCTTTGGACCATTGACCCCAAGAGAGCCAAGAGAATTTTGGCAAATCGTCAATCTGCTGCTCGATCAAAAGAAAGAAAGACCCGTTACATTCAAGAGCTTGAGCGCAGAGTTCAGACCCTTCAGACTGAAGCCACCACCCTTTCTGCCCAACTTACACTATTCCAGAGGGATACAACAGGTCTGAGTAATGAAAATGCGGAGCTTAAGCTTCGATTACAAGCGATGGAACAACAAGCTCATCTTCGTGACTCTCTAAATGAGACACTAAAGAAGGAAGTTGAGAGACTCAAGGTTGCTACAGGAGACACGACGAATCCTTCTGAGTCTTTTAATCTGTTAATGCATCAGATTCCATTCACAGCAGCAAATTTCTTCACTCTTCCTCCTCATGCTCAAGCTCATGGACAAGAAGCCCTGGAAATGCGGTCATTCAATCATCCTCAGTCAAGCATTTCAACTTACCAAACACATCAACCAAGTTCTCATTCATTCACAGACGTATTACAGAATGATCAAATTGGGCGTTTAAAAGGGCTTGACATTAACAGCAAAGGATCAGCACTTGTGAAGTCTGAAACCCCTTCACTCTCAGCAAGTGAGAGTGGAACCTTCTAG 1293 0.4671 MHQDPPFSSNSNKFNSSSLKLNTNVNLNFSSSHRPHLPPTPPLAFANANANSSSPSATASSSSSIFIRNGDGAGNGTLGGTHLDQNHHHHHRRAHSEVSFRLPEDLMDLSPSNPFNGGGSSTASLEELGSEDDLFSTYIDVDKLGGGDGSATGSGGGANGSPDQSGNGNPKDTVEGDKSSDLSPTTSGNARPRHRHSCSVDGSISNSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKTRYIQELERRVQTLQTEATTLSAQLTLFQRDTTGLSNENAELKLRLQAMEQQAHLRDSLNETLKKEVERLKVATGDTTNPSESFNLLMHQIPFTAANFFTLPPHAQAHGQEALEMRSFNHPQSSISTYQTHQPSSHSFTDVLQNDQIGRLKGLDINSKGSALVKSETPSLSASESGTF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00541 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 294 IPR004827 GO:0003700|GO:0006355
Pte8g00541 430 Pfam bZIP transcription factor 233 280 IPR004827 GO:0003700|GO:0006355
Pte8g00541 430 Coils Coil 249 276 - -
Pte8g00541 430 MobiDBLite consensus disorder prediction 154 202 - -
Pte8g00541 430 SUPERFAMILY Leucine zipper domain 233 284 IPR046347 GO:0003700|GO:0006355
Pte8g00541 430 FunFam probable transcription factor PosF21 232 285 - -
Pte8g00541 430 MobiDBLite consensus disorder prediction 27 125 - -
Pte8g00541 430 MobiDBLite consensus disorder prediction 146 202 - -
Pte8g00541 430 Coils Coil 284 304 - -
Pte8g00541 430 Gene3D - 232 284 - -
Pte8g00541 430 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 48 390 - -
Pte8g00541 430 MobiDBLite consensus disorder prediction 45 70 - -
Pte8g00541 430 SMART brlzneu 229 293 IPR004827 GO:0003700|GO:0006355
Pte8g00541 430 CDD bZIP_plant_RF2 234 283 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00541 Pte-Chr8 26496671 26500600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00541 90 425 bZIP Transcription Factor Family AT2G40620 51.111 1.94e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte8g00541 bZIP_1 1.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00541 - - gmx:100790732 453.751