Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00529 ATGATCATGGTGGACGAAACACACAATGATGCCAAGGAAGAGGTAACAGAAATTACTCCATTTGATCCTACTAAGAAGAAGAAGAAGAAAAAGAAGGAAGTTGTCATCCATGATACTGCTGATGAATCAGTGGACAAGTTGGCGGAAAAAACAGGAACCCTGTCAGTTTCTGACGGGATTGAAAGCTCCTTCTCTGGGTTGAAAAAGAAGAAGAAGAAGAAACCAGTCGAAACCAGTTCCTTGACTGATGAAGGTGAAGCAGTCGATGATCTGGATGATGACGGTAGAGAGAACAAGGAAGAGGAAGAAGCTGTTATACAACGACCTTGTTATCCTTGGGAAGGGAGTGACAGAGACTATGAATATGAGGAGCTTCTTGGTAGGGTGTTTAACATTCTGCGTGAGAATAATCCAGAGTTGGCTGGAGACAGGCGTAGGACAGTTATGAGGCCTCCCCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTGAATTTGATGGATCTCTGCAAGACGATGCACAGGCAGCCGGATCATGTCATGGCATTCTTGCTTGCTGAACTGGGTACAAGTGGATCTCTTGATGGACAGCAAAGATTAGTTGTCAAGGGAAGATTCGCCCCCAAAAACTTCGAAGGAATTCTGCGAAGATATATCAATGAGTATGTCATTTGCATTGGTTGCAAAAGTCCAGACACAATTCTTTCAAAGGAGAACCGTCTCTTCTTCCTCAGATGCGAGAAGTGTGGATCTGGTAGATCAGTTGCTCCTATCAAAGCTGGCTTCGTTGCTCGTGTCGGCCGTAGAAACCAAGGGACTTGA 825 0.4448 MIMVDETHNDAKEEVTEITPFDPTKKKKKKKKEVVIHDTADESVDKLAEKTGTLSVSDGIESSFSGLKKKKKKKPVETSSLTDEGEAVDDLDDDGRENKEEEEAVIQRPCYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNLMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNQGT* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00529 274 MobiDBLite consensus disorder prediction 83 99 - -
Pte8g00529 274 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 223 258 IPR016190 GO:0003743|GO:0006413
Pte8g00529 274 FunFam Eukaryotic translation initiation factor 2 subunit 117 259 - -
Pte8g00529 274 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 123 273 IPR045196 GO:0003743|GO:0006413
Pte8g00529 274 MobiDBLite consensus disorder prediction 1 105 - -
Pte8g00529 274 Gene3D - 117 259 - -
Pte8g00529 274 SMART eIF2Bneu4 144 253 IPR002735 GO:0003743|GO:0006413
Pte8g00529 274 MobiDBLite consensus disorder prediction 34 48 - -
Pte8g00529 274 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 119 226 IPR016189 GO:0003743|GO:0006413
Pte8g00529 274 Pfam Domain found in IF2B/IF5 143 252 IPR002735 GO:0003743|GO:0006413
Pte8g00529 274 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00529 Pte-Chr8 25613521 25616054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00529 3 270 Eukaryotic Initiation Factors Gene Family AT5G20920 72.963 4.11e-130 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00529 K03238 - zju:107411571 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00529 8 25613521 25616054 Pte8g00529 8 25613521 25616054 RCT