Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00524 ATGGCAAAGGGTCGCACTGTAAGTACATATGAAGATGCTCGCAACCAACGACTTGAAGAAAACAGAAAGAAATTTGAGGACTTGGGAATATTAACAGTATCTAAAAGTTTGACTACGCTTAATAGTTCTGGAAAGAAGATTCAGCTTCCAAAATTGCGATCCAAAACTGATCCTGTGTCGGAGCCTCGACGTTCTTCACGTGTACGTAATACAGTGGTTTCATACTCTGAAGATGTTAACATAAACCTTCCAAAACTGAGGAAAAGATCAAAGCCTGGGTCAGGAAGTTATCTTGCAAGGCCAGCAAGTGAAGTCAAAGAAGCTACTGATGAAGAGAGATTTTGTGCTTTGGAGGCTGCAGAAGCTCTGCGAAAAACCTTAGAATCTGGACATCCATCATTTGTCAAATCGATGCTCCGATCTCATGTTTATAGCTGTTTTTGGTTGGGTCTTCCAACTAAATTTTGTGAGGACTACCTCCCAAATAAGGTGTGGAATATGACCTTGGAAGATGAAAATGGCACGGAATATGATGCTGTATTAATTGGAAACAGAACTGGACTTAGTGGGGGCTGGAGAGCATTTGCATTGGATCATAAGTTGGATGATGGCGATGCTCTTGTTTTCGAACTAACAGATCCAGCAAGATTTAAGGTTTACATTATTAAGGCGGTTCCCAACTCAGCTCAGGATGGTGATATTTTGAAGAAAGATGATTCTGCTGGAAAGGTGGATACGAAGCTTGGCTCTCAGGCAAACTTGACTCGAAAGTCAAAGCGTTTATGTACTCCTAAGAAATCCAGTGACTCTGGAAGTACTGAAAAGCAGCCTATGGAAAATGCTGCACAGGATGGAGTCAAATCAAGAAAGAGAAAGCCAGTAAGAAAGTCTACTCGTCTTAGTAAAACAACCACGAAAGGGGAGAGATCAACGTCAATGGTAAAAGATGAACTAGAGGAAGATGTAGTGAAGCCAACAGTTCACCATAATCCCACATCAGAAAGCAAGTCGCCGGATGATATTGAGATAACGAATGAAGAACCAGATGAAGATGTTGACAACGAAGAACCAGCTGACGATGCTGACAAGTTTAGATTAAAAGAGCCAAGAACGAAAGCTGCTGCAAACAAAGATAAGGAAAACACTAATCATAAGAAACCAAAAGAAGACAAGTCGCCTGATAATACTGAAAACAAGAATAAAGAGACATGGCAGAGTCTAGACAAAACCAAATCACAGAATCGAAAACGGGGAGCTGCTCCAAGGCTTTTCCGAAGGAGATGGTAG 1287 0.4134 MAKGRTVSTYEDARNQRLEENRKKFEDLGILTVSKSLTTLNSSGKKIQLPKLRSKTDPVSEPRRSSRVRNTVVSYSEDVNINLPKLRKRSKPGSGSYLARPASEVKEATDEERFCALEAAEALRKTLESGHPSFVKSMLRSHVYSCFWLGLPTKFCEDYLPNKVWNMTLEDENGTEYDAVLIGNRTGLSGGWRAFALDHKLDDGDALVFELTDPARFKVYIIKAVPNSAQDGDILKKDDSAGKVDTKLGSQANLTRKSKRLCTPKKSSDSGSTEKQPMENAAQDGVKSRKRKPVRKSTRLSKTTTKGERSTSMVKDELEEDVVKPTVHHNPTSESKSPDDIEITNEEPDEDVDNEEPADDADKFRLKEPRTKAAANKDKENTNHKKPKEDKSPDNTENKNKETWQSLDKTKSQNRKRGAAPRLFRRRW* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00524 428 MobiDBLite consensus disorder prediction 343 357 - -
Pte8g00524 428 MobiDBLite consensus disorder prediction 358 415 - -
Pte8g00524 428 MobiDBLite consensus disorder prediction 50 64 - -
Pte8g00524 428 SUPERFAMILY DNA-binding pseudobarrel domain 127 223 IPR015300 -
Pte8g00524 428 SMART B3_2 134 225 IPR003340 GO:0003677
Pte8g00524 428 CDD B3_DNA 132 223 IPR003340 GO:0003677
Pte8g00524 428 MobiDBLite consensus disorder prediction 265 279 - -
Pte8g00524 428 ProSiteProfiles B3 DNA-binding domain profile. 134 225 IPR003340 GO:0003677
Pte8g00524 428 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 46 227 IPR044837 -
Pte8g00524 428 MobiDBLite consensus disorder prediction 232 428 - -
Pte8g00524 428 Pfam B3 DNA binding domain 134 223 IPR003340 GO:0003677
Pte8g00524 428 MobiDBLite consensus disorder prediction 309 342 - -
Pte8g00524 428 MobiDBLite consensus disorder prediction 48 69 - -
Pte8g00524 428 Gene3D - 108 225 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00524 Pte-Chr8 25483978 25487992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00524 10 228 B3 DNA Binding Superfamily AT5G58280 44.177 4.15e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte8g00524 B3 1.9e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00524 - - adu:107458051 315.079