Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00522 ATGGACGACGATATTGTTTTGCAGAAGTGGTTTTCTCGGATTCTTCAGTTCCCATTGACAAATGTGATAGATTGGCATTGTATTTCTGATAAGGAGGAGAAATGGAAGATTGAGCTGAAACCCCACAACCCTTCTCAGTATTTGATTGATTTGTTTCTATGCATCAAATGTTTGGTGTTTCTCGTGCTCTGTATCAAGCCTGCTTCATGTCAGGTTTGGGATGGAGTGGTTGTAACAGAAGCAAATTACCAAGCTTTGCAAGCATTCAAGCAAGAGCTAGATGATCCTAGAGACTTCTTGAGAAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGTGGTTGGGTTGGTATCAAGTGTGCTCAAGGGCAAGTGATTGTTATTCAGCTTCCATGGAAGCATTTGGGTGGCCGTATCACTCAGAGAATTGGCGAGCTTCAAGGACTAAGAAAGCTTAGTCTCCATGACAATCTTATTGGGGGTTCAATCCCTTCGTCACTGGGGTTCCTCCCAAACCTCAGAGGCCTTCAGCTCTTCAAGAACAGGCTCACTGGTTCGATTCCTCCTTCATTAGGTTCTTGTTCTTTGCTTCAAACTTTGGATTTGAGTATCAACTCTCTAACTGGTTCTATTCCTGAGAGTCTTGTGAACTCCACAAAGCTTTATAGGCTCAATTTGAGCTACAATGTGTTGTCAGGTCCAATCCCACTTAGTTTCACTCGTTCAGCTCCTCTCATGTTTCTTGCACTCCAACACAACAACCTATCTGGTTCAATCCCAAACACTTGGGGTGGGACACAGAAGGACAATATTTTTAGACTCCAGTCACTGACACTAGATCACAATTTTTTCACTGGAAGCTTCCCTTCTTCTTTGGGAAGCTTGAGTGTGATACAAGAAGTTTCCATGAGCAACAATGAGTTAAGTGGACCCTTGCCAAAAGAGATAGGTAGTTTTTCACGGTTGAAAACACTAGACCTTTCGAATAACGCCATAAATGGAAGCTTGCCTGATACTCTCTCCAATTTGTCCTCACTTGCTTTGTTAAATATGGAGAACAACAAACTTGATGGTTCAATCCCAGAAGCTCTACACTCGCTACATAATCTTTCTGTTTTAAACTTGAGGAGAAACCAACTCAGTCGTCAGATTCCTGCAACCTTCGGAAACATATCTTTGCTTACTCAACTTGATTTGTCACAAAATAATCTCAGTGGAGAAATCCCAGCCTCACTTGGTAGTTTAACAAGTCTGAGGCTTTTCAATGTTTCCTACAATAATCTTTCTGGTCCAGTTCCTACCTCTCTCTCCCAAAAATTTAACTCAAGCTCTTTCATGGGAAATATTCAGTTATGTGGGTACAGTTCCTCAACCAGATGTCCTTCCCAACCTGGAGTACCATCTCCATCTCCCCAATTACCACAACCTCATCACAGAAAACTAAGTACCAAAGACATAGTACTCATTGTTGCTGGAGCACTTCTTGTCATTTTGCTGGTGCTGTGTTGCATATTGCTCTTCTGCCTTATAAGGAAAAGGGAAGCAGCAAGAGCAAATGGCAGAGCCACAGGAAGAGCAACACCTACCAGAACTGAAAAGGAGGTGCCTCCTACTGCAGGAGAAGTTGAAGCAGGAGGAGAGGCTGGTGGGAAATTAGTCCATTTTGATGGACCAATTGCGTTTACAGCTGATGATCTTTTGTGTGCCACCGCAGAGATAATGGGGAAAAGCACATATGGAACTGTCTACAAAGCTACACTGGAAGATGGAAACCAAGTTGCAGTGAAAAGATTAAGAGAGAAGATTACTAAAAGTCAGAGAGAGTTTGAAACTGAAGTCAATGTTCTTGGAAAAATTCGACATCCAAATCTGTTGGCTCTACGGGCTTATTACTTAGGCCCCAAAGGAGAGAAGCTTCTCGTCTTCGATTACATGCCTAAAGGAAGTCTTGCTGCCTTCCTGCACGCTAGAGGACCTGAAACTCAAATCGATTGGCCAACTAGGATGAGAATAGCACAGGGCATGGCAAGTGGCTTGTATTACCTTCACAACAACGAGAACATCATACATGGGAACCTTACATCCAACAATGTTCTACTCGATGAGAACACAAATGCGAAAATTTCAGATTACGGCCTTGCTCGTCTAATGACAGCTGCTGCTAGTTCTAACGTGATTGCCACTGCAGGAGCATTAGGCTATAGAGCGCCTGAGCTTTCCAAGCTTAAGAAAGCCAACACAAAGACTGACGTTTACAGCCTTGGTGTTATTTTACTTGAACTCCTAACCGGTAAGTCGCCGGGCGAGGCCATGAATGGGGTAGATTTGCCACAGTGGGTTGCTTCCATTGTAAAAGAAGAATGGACAAATGAGGTTTTCGATGTGGAGTTGATGAGGGATCCATCAACAGTTGGAGATGAGTTGCTCAATACATTGAAGCTTGCTTTGCATTGTGTTGATCCTACCCCTTCAGCACGACCAGAAGTTCAGCAAGTACTTCAGCAGTTAGAAGATATCAGACCAGAGATATCAACTAGTTTTGCAGGTGATGATGTACCTGGGGCTCCCTCAACAAGCGAATAG 2583 0.4344 MDDDIVLQKWFSRILQFPLTNVIDWHCISDKEEKWKIELKPHNPSQYLIDLFLCIKCLVFLVLCIKPASCQVWDGVVVTEANYQALQAFKQELDDPRDFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKHLGGRITQRIGELQGLRKLSLHDNLIGGSIPSSLGFLPNLRGLQLFKNRLTGSIPPSLGSCSLLQTLDLSINSLTGSIPESLVNSTKLYRLNLSYNVLSGPIPLSFTRSAPLMFLALQHNNLSGSIPNTWGGTQKDNIFRLQSLTLDHNFFTGSFPSSLGSLSVIQEVSMSNNELSGPLPKEIGSFSRLKTLDLSNNAINGSLPDTLSNLSSLALLNMENNKLDGSIPEALHSLHNLSVLNLRRNQLSRQIPATFGNISLLTQLDLSQNNLSGEIPASLGSLTSLRLFNVSYNNLSGPVPTSLSQKFNSSSFMGNIQLCGYSSSTRCPSQPGVPSPSPQLPQPHHRKLSTKDIVLIVAGALLVILLVLCCILLFCLIRKREAARANGRATGRATPTRTEKEVPPTAGEVEAGGEAGGKLVHFDGPIAFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKITKSQREFETEVNVLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLAAFLHARGPETQIDWPTRMRIAQGMASGLYYLHNNENIIHGNLTSNNVLLDENTNAKISDYGLARLMTAAASSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDPSTVGDELLNTLKLALHCVDPTPSARPEVQQVLQQLEDIRPEISTSFAGDDVPGAPSTSE* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00522 860 Gene3D Ribonuclease Inhibitor 245 459 IPR032675 -
Pte8g00522 860 Pfam Leucine rich repeat 320 380 IPR001611 GO:0005515
Pte8g00522 860 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 272 839 - -
Pte8g00522 860 Gene3D Transferase(Phosphotransferase) domain 1 646 850 - -
Pte8g00522 860 ProSiteProfiles Protein kinase domain profile. 568 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00522 860 Gene3D Ribonuclease Inhibitor 79 243 IPR032675 -
Pte8g00522 860 Pfam Leucine rich repeat N-terminal domain 83 120 IPR013210 -
Pte8g00522 860 SUPERFAMILY L domain-like 119 461 - -
Pte8g00522 860 ProSiteProfiles Leucine-rich repeat profile. 321 344 IPR001611 GO:0005515
Pte8g00522 860 Gene3D Phosphorylase Kinase; domain 1 574 645 - -
Pte8g00522 860 SUPERFAMILY Protein kinase-like (PK-like) 572 840 IPR011009 -
Pte8g00522 860 FunFam Leucine-rich repeat receptor-like protein kinase 553 644 - -
Pte8g00522 860 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 238 464 - -
Pte8g00522 860 CDD STKc_IRAK 574 839 - -
Pte8g00522 860 FunFam Pollen receptor-like kinase 1 645 848 - -
Pte8g00522 860 SMART LRR_typ_2 343 366 IPR003591 -
Pte8g00522 860 SMART LRR_typ_2 391 415 IPR003591 -
Pte8g00522 860 SMART LRR_typ_2 146 168 IPR003591 -
Pte8g00522 860 SMART LRR_typ_2 367 390 IPR003591 -
Pte8g00522 860 SMART LRR_typ_2 170 194 IPR003591 -
Pte8g00522 860 SMART LRR_typ_2 319 342 IPR003591 -
Pte8g00522 860 FunFam Leucine-rich repeat receptor-like protein kinase 79 237 - -
Pte8g00522 860 MobiDBLite consensus disorder prediction 519 543 - -
Pte8g00522 860 Pfam Protein tyrosine and serine/threonine kinase 571 836 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00522 Pte-Chr8 25462653 25465586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00522 73 841 Receptor kinase-like Gene Family AT3G51740 66.108 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte8g00522 PK_Tyr_Ser-Thr 4.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00522 - - qsa:O6P43_013796 1233.39