Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00496 ATGGAGCAAGAAACAACAGCTAAGCCAACTGAGGAGCAGCCATGTGTAGTAGAAGACAAGCAACTGTCGAGTGAAGAAATAATGAGGATAGCAGCAGAAAGGTTTGTACATGCTAATGATTCTCCAAATAGTAACCAACCTTTTGGAATTTCCTTCTTGGAATCTGAGCTGCCTAATGAAGTGCTCAAGGATGTAGAACTCGCAGAGACTCTTCTCCTTTCAGCTAAGGAAGTAGACAACGAGAAGTATGATGATGCATCCGAAATACTTAATCATTGTGATTCTCTGTCTTCGAATACAGGAAGTACTGTTCAAAGGATTGTCTTCCATTTTTCTCAAGCTTTATGGAAGAGAATACATACAAGAACAGGTAAGGCTAAAACAAGCGGTTTAAGTATAACACAACCATTCAATCTTTACGAGGCCATGTTGAAGGATTCTGTCACTGTACTTGCACTTCAAGAAAAGCTTCCTTTTTGTCAAATTACACAATTTGTTGGGGTTCAAGCCATCGTAGAAAGCATGGCTAATGCTAAGAAGGTTCATGTGATTGATTTCGGAATTAAGACAGGATCGCAATGGCCAATATTGATGCAGGCTCTTGCATCCAGAAATGAACCTGCACTTGAGCTTTTAAAAATAACTGCTGTAACAACAGTGTCATTCCGTTTGATTGAAGAAACAGGAAAGAGGTTAATGAATTTTGCTGCTTCCATGAAAATACCCTTTGTTTTTAGGGCAGTCATGGTGACAGACATGTTAAACCTTAAGGAAGTTTTCTTTCATAAAGGTTTGGATGAAAAGGTTGCTGTCTACACATCATTTTCATTAATGAGCCTCCTTGGTTGCCCTGACAGGCTTGATGCGTTTATGAAGGTTGTAAGAAACATGAATCCTAGAATCATGTTTGTTGCAGAAATTGAGGCTAATCACAGTTCCAAGTCATTTATCAACCGTTTCACTGAGGCACTTTTCTACCACTCTGCATTCTTCGATTGTTTTGATACTTTCATGCCGAGGAGTGACCCTCACAGAATGGTTTCAGAATCATTGTATTTCAGTCAAGGTATATCGAACATTCTGGCAGCTGAAGGAGAGGAAAGAAATGTTAGACATGTAAAAATTGATGTGTGGAGGAAATATTTTGCCCGCTTTGGAATGATGGAGATGGAGCATAGCTCTTCAGCCTTACATCAAGCAAATATATTGGTGAAGAAATTTGATTGCAAGGGTTCTCTCACTATAGATAGAAATGAGAGTAGCTTAATTCTTAGTTGGAAGGGCACACCACTTCTCTCACTTTCAGTTTGGGATTTCTTGATTTGA 1326 0.3914 MEQETTAKPTEEQPCVVEDKQLSSEEIMRIAAERFVHANDSPNSNQPFGISFLESELPNEVLKDVELAETLLLSAKEVDNEKYDDASEILNHCDSLSSNTGSTVQRIVFHFSQALWKRIHTRTGKAKTSGLSITQPFNLYEAMLKDSVTVLALQEKLPFCQITQFVGVQAIVESMANAKKVHVIDFGIKTGSQWPILMQALASRNEPALELLKITAVTTVSFRLIEETGKRLMNFAASMKIPFVFRAVMVTDMLNLKEVFFHKGLDEKVAVYTSFSLMSLLGCPDRLDAFMKVVRNMNPRIMFVAEIEANHSSKSFINRFTEALFYHSAFFDCFDTFMPRSDPHRMVSESLYFSQGISNILAAEGEERNVRHVKIDVWRKYFARFGMMEMEHSSSALHQANILVKKFDCKGSLTIDRNESSLILSWKGTPLLSLSVWDFLI* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00496 441 Pfam GRAS domain family 69 437 IPR005202 -
Pte8g00496 441 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 432 IPR005202 -
Pte8g00496 441 ProSiteProfiles GRAS family profile. 58 438 IPR005202 -
Pte8g00496 441 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00496 Pte-Chr8 23593628 23594953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00496 65 437 GRAS Transcription Factor Family AT1G66350 31.649 1.86e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte8g00496 GRAS 3.4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00496 - - qsa:O6P43_021850 471.47