Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00488 ATGGTTGAGATGCCTTCATCTTCAACTGCTCTTCAATGGTTAAGCCTTGTGGGCATCATATGGCTCCAAGCCATAAATGGAACAAACACTAATTTGCCTTCTTACTCATCCCAACTGAAGCAGCTTCTCTCCATGTCACAATTACAACTCAACAACCTTGCATTTGCTTCTGATGCTGGAAAGCTATTTGGCTGGATTTCTGGGGTTGCTGCTACCTACCTCCCCCTTTGGTTAGTTCTCATACTCGGTTCAACTCTCAGTTTGATTGGCTATGGTCTGCAGTATCTGGTTGTGACAAACCAGATTTCTTCACTACCTTACTGGCAAATTTTCTTCCTCACTGTTCTGTCAGGAAACAGCATTTGTTGGATCAACACTGTCTGCTATGTTGTTGCAATAAAAAACTTCCCCTTTTCTGATTCTCAAGTTGCTGTTGCATTGACAACAAGTTATCAAGGATTGAGTGCAAAACTTTACACAAATATTGTTGAAGCTATTGCCCCTCACAAAAAGGCACAAGCTTTTCTTCTTCTGAACTCAATCATACCATTGACTATTTGCGCTGTGACAATACCATTTGTCAGACATTTGAAAGTTGGAAGAGCTAGAAATTTTGGAATGGGGTTCATAGCAATGTTTGTCATTACAGTAACAACAGGAATTTATGCTGTGATGAGCAGCTTACAGTTTGCATCAACGAAAATTTCTTCGTTCACTAATATGGTTGGTATTTTGGTGGCCTTACTGCTACCTCTAGGAATTCCATTAGCTGAAATGATCAAGAAGGTATGGGAGAAATGGTACAGAGAAGGCGAAATCAAAGTCCATCACATTACTGTAGAAAATACCATTATCAGAGAACGTGAAAATGGTTTTACCAAAACAGATGATTATACAGCAGAGGAAAACAGAGTTGTTGCAGAAGGATTTGAAAATGATGATGAAGATAGAGATGATACAGAAGTTCATCAGGTTGTTGTTAAAGAAGAGATTGGTGTGAACTTGATGATAAGGAGAGTCGAATTCTGGCTATACGTCTCTGCGTATTTCTTAGGCCCAACTCTTGGTTTGGTGTTTTTGAACAACTTGGGACAAATAGCTGAGTCTCGTGGGTGTTCTGGTACTTCATCATTGGTGTCTCTGTCTTCATCCTTTGGTTTTTTTGGTCGCCTCATGCCAGCCTTTGGTGACTACTATTTCTCAAGGAGAAAGAATACCATTTCAAGACCAGCTTCCATAGTTGTGCTGATGACTCCAATTGCTGGAGCTTTCTTTTTACTAGCGAACAAGACAGACCTTGCCTTATACATCAGCACTGCAGTTATAGGAGTATGCACAGGTGCAATTACATCGATAGCTGTGTCAACCACCACTGAGCTGTTTGGGACAAAGAACTTTTCTGTAAATCACAACGTGGTTGTTGCCAACATTCCTGTGGGTTCTTTTGCTTTTGGCTTCTTAGCTGCTGGGCTATACCATAAGGAAGGTGATGGACGTGGGAAATGTTTAGGGATGGAGTGCTACAAAAACACTTGTATCATTTGGGGTTGCCTGTGTGTTCTTGGAACATTGCTAGCTTTAATTCTACACTGTCGTACTAGAAAATTTTACTCACATCCGAGACAACAGGAGGTTATGAACATGAGTTAG 1650 0.4073 MVEMPSSSTALQWLSLVGIIWLQAINGTNTNLPSYSSQLKQLLSMSQLQLNNLAFASDAGKLFGWISGVAATYLPLWLVLILGSTLSLIGYGLQYLVVTNQISSLPYWQIFFLTVLSGNSICWINTVCYVVAIKNFPFSDSQVAVALTTSYQGLSAKLYTNIVEAIAPHKKAQAFLLLNSIIPLTICAVTIPFVRHLKVGRARNFGMGFIAMFVITVTTGIYAVMSSLQFASTKISSFTNMVGILVALLLPLGIPLAEMIKKVWEKWYREGEIKVHHITVENTIIRERENGFTKTDDYTAEENRVVAEGFENDDEDRDDTEVHQVVVKEEIGVNLMIRRVEFWLYVSAYFLGPTLGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLMPAFGDYYFSRRKNTISRPASIVVLMTPIAGAFFLLANKTDLALYISTAVIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPVGSFAFGFLAAGLYHKEGDGRGKCLGMECYKNTCIIWGCLCVLGTLLALILHCRTRKFYSHPRQQEVMNMS* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00488 549 Gene3D MFS general substrate transporter like domains 300 536 IPR036259 -
Pte8g00488 549 Pfam Nodulin-like 12 255 IPR010658 -
Pte8g00488 549 SUPERFAMILY MFS general substrate transporter 9 535 IPR036259 -
Pte8g00488 549 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00488 Pte-Chr8 23239931 23241742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00488 7 539 Nodulin-like Gene Family AT2G30300 45.772 9.56e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00488 - - cave:132164102 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00488 8 23239931 23241742 Pte8g00488 8 23239931 23241742 RCT