Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00447 ATGCTGACATTCTTGGGTTTTTCCCTAGCCTCATCAGTTGCTTATGCTGCTCAAGGAACTGCAACCTTCTATAACTCATATAAGCATAAAAAAACGAGGTCGGAACTTGATTTAATTGGCGACATATGTGTGTGTGTTTGTGTGCACGCAGCTTCTGCATGCTATGGGCATCAAGAGCTAGGTGTGATGATAGCTGCAGCAAGTAAAGCTATATGGGAGAACGGGGCAGCATGTGGAAGAAGGTATAGAGTGAGATGCATTGGTGGGACAAATGCTACTCCAAATCCTTGCAAAGGTGGCAGTGTTGTGGTGAAAGTTATTGATCATTGTCCTCCTGGAGGATGCTACGCCACCATTGATTTATCCCAGGAGGCATTTGCTGCCATTGCTAATCCTGATGCTGGGAAAATTAGGATTCAGTTTGATCGGTACGTAATTAGCTTAGTCCCATCATGCTGA 459 0.4466 MLTFLGFSLASSVAYAAQGTATFYNSYKHKKTRSELDLIGDICVCVCVHAASACYGHQELGVMIAAASKAIWENGAACGRRYRVRCIGGTNATPNPCKGGSVVVKVIDHCPPGGCYATIDLSQEAFAAIANPDAGKIRIQFDRYVISLVPSC* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00447 152 CDD DPBB_EG45-like 17 141 - -
Pte8g00447 152 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 8 142 IPR044206 GO:0009627|GO:0048046
Pte8g00447 152 SMART dpbb_1 64 141 IPR007112 -
Pte8g00447 152 SUPERFAMILY Barwin-like endoglucanases 9 143 IPR036908 -
Pte8g00447 152 FunFam Barwin-related endoglucanase 39 143 - -
Pte8g00447 152 Gene3D - 15 144 IPR036908 -
Pte8g00447 152 Pfam Lytic transglycolase 65 141 IPR009009 -
Pte8g00447 152 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 143 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00447 Pte-Chr8 20599861 20600468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00447 57 143 Expansin Gene Family AT2G45110 34.694 2.54e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00447 - - jre:109018768 145.976