Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00445 ATGATAGCTGCAGCAAGTGATGCAATATGGAACAACAGGGCAGCATGTGGAAGAAGGTATAGAGTGAGATGCATTGGTGGAACAAATGCTACTCCAAATCCTTGCAAAGGTCGCAGTGTTGTGGTGAAAGTTGTTGACTATTGTCCTCCTGGATGCCGTGCCACCATTGATTTATCTCAGGAGGCATTTGCTGCCATTGCTAATCCTGATGCTGGGAAAATCAGGATTCGGTTTGATCGGGTCTGA 246 0.4634 MIAAASDAIWNNRAACGRRYRVRCIGGTNATPNPCKGRSVVVKVVDYCPPGCRATIDLSQEAFAAIANPDAGKIRIRFDRV* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00445 81 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 1 79 IPR044206 GO:0009627|GO:0048046
Pte8g00445 81 CDD DPBB_EG45-like 1 78 - -
Pte8g00445 81 Pfam Lytic transglycolase 3 78 IPR009009 -
Pte8g00445 81 SMART dpbb_1 2 78 IPR007112 -
Pte8g00445 81 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 81 IPR007112 -
Pte8g00445 81 Gene3D - 1 81 IPR036908 -
Pte8g00445 81 SUPERFAMILY Barwin-like endoglucanases 1 81 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00445 Pte-Chr8 20574747 20575354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00445 1 80 Expansin Gene Family AT2G45110 35.870 3.02e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00445 - - qsa:O6P43_002923 139.813