Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00433 ATGGAGATTGATCAACCTAGTTATGATGTTGCTAGTGTTGGTCTTGAAAATCATCGTGAGAAGCCATTTACAAAATCTACTGGAGTTGAGAGAGGAATATACCTATCATGGGAAGACTTAACAGTTGTGATTCCAAATTTTGGCGATGGACACACAAGGAGATTACTCAATGGGTTGCATGGATATGCTGAACCTGATAAGATCGTGGCTATTATGGGACCTTCTGGGTCTGGAAAATCAACCCTAATTGATGCTTTAGCAGGTAGACTTTCTGGAAATGCTATCATGACTGGAAATGTGCTGCTTAATGGAAAGAAAAGAACTCTGCAGGCTCGTGGCATTGTTGGATATGTGACCCAGGAAGATGTGTTGTTGGGGACACTCACAGTGAGGGAAACTATATGGTACTCCGCTCATCTGAGGCTTCCACCTACCATGGACAAACAAGAGGTTGATGAAACTGTAGAAGCAACAATCATGGAAATGGGTCTTCTTGATTGTGCCAACACTCTCGTAGGAAACTGGCATCTAAGAGGCATAAGTGGTGGAGAAAAGAAGAGACTAAGCATTGCACTTGAAATTATCAAGAGGCCCCAACTCTTGTTCCTTGATGAACCAACCACTGGTTTGGACAGTGCTGCTGCCTTCTTTGTTATTCAAACTCTTAGGAACATTGCACATGATGGAAGAACTGTTATCACTTCCATCCATCAGCCAAGTGGTGAAGTCTTTGCACTTTTTGACGACCTCTTCCTTCTTTCTGGTGGCCAAACGGTTTATTTTGGACCAGCCAACAGTGCAGTTGAGTTTTTTGCAGAATCAGGATTTCCATGCCCGAGTAGAAGAAATCCTTCCGATCACTTTCTTCGCTGTATCAATTCAGCCTTCGACACAGTTGGGATGGCTTTGAATGGTTCGCAAAGATTTCAGTTTCAGGAGGAAGATATATCAATACGGTCTTTAATGAAGATCCCAACTGCACAAATCAAAGCAACACTGATTGAAAAGTATTGGATGTCAGAGCAAGGTAAGAGGATGACAGAGCGAATTAAGGAGATCTCCACTATCACCGAAGGGCTCAATGTTGTAACGAGTGAAGATGGGAAGCAATCAAAATGGTGGAAGCAACTCTCAGTATTGATTCGTAGATCATTATTGAATATGTCTAGAGACCTAGGCTACTACTGGATAAGGATCATAATATATATAGCATTATCAGTCTCTGTGGGGACTATATTTTTCGATGTTGGAACCAGTTACAGTGCCATTTTTGCAAGAGGAGCGTGTGGTGGATTTGTCTCAGGTTTCATGACATTCATGTCAATTGGAGGCTTCCCATCTTTCATCGAAGAAATGAAGGTGTTTTACAAAGAAAGACTCAATGGGCATTATGGTGTTTCTGTGTACATCCTCTCCAATTTTCTCTCCTCATTTCCCTTTATAGTTGCGCTGTCTTTTTCTTCTGGTACTATAACTTACTACATGGTCAAATTTCGGACAGAGATTTCCCATTATTTTTACATTTGCCTTGATCTAACAATCTCAATTGCTGTTGTTGAGAGCTCCATGATGCTTATTGCTTCACTTGTTCCCAACTTCCTGATGGGAATAATTATAGGAGCTGGATACATTGGTATCATGATGTTGACTTCTGGCTTCTTCCGCTTGTTTCCTGATCTTCCTAAAATTTTCTGGCGTATTCCAATTTCATACATAAATTATGGTGCATGGGGATTGCAGGGAGCATACAAGAACGACATGATTGGGCTTGAATTCGACCCACTGGTAGAAGGTGACCCTAAACTCAAAGGGGAAGTTATACTTACAACTATGCTTGGCATTGAACTAAATCACTCAAAGTGGTGGGACTTGGCAGCTGTGCTCCTCATTCTCCTCCTCCTGAAATTTCTTTTCTTTTTCGTTCTTAAATTTAAGGAGCAAGCCTCTCCATTTTTTCGTACGCTGTACGGAAAGAAAGCTCTGCAATGGATCGAGAAGCGGCCATCATTCAGAAAAGCACCTTCGTTTCCTTCAAGAAGGCATCACACGCTGCATTCACTGTCTTCCCAAGAAGGACTCAGCTCTCCCTTCCGTTGA 2097 0.4196 MEIDQPSYDVASVGLENHREKPFTKSTGVERGIYLSWEDLTVVIPNFGDGHTRRLLNGLHGYAEPDKIVAIMGPSGSGKSTLIDALAGRLSGNAIMTGNVLLNGKKRTLQARGIVGYVTQEDVLLGTLTVRETIWYSAHLRLPPTMDKQEVDETVEATIMEMGLLDCANTLVGNWHLRGISGGEKKRLSIALEIIKRPQLLFLDEPTTGLDSAAAFFVIQTLRNIAHDGRTVITSIHQPSGEVFALFDDLFLLSGGQTVYFGPANSAVEFFAESGFPCPSRRNPSDHFLRCINSAFDTVGMALNGSQRFQFQEEDISIRSLMKIPTAQIKATLIEKYWMSEQGKRMTERIKEISTITEGLNVVTSEDGKQSKWWKQLSVLIRRSLLNMSRDLGYYWIRIIIYIALSVSVGTIFFDVGTSYSAIFARGACGGFVSGFMTFMSIGGFPSFIEEMKVFYKERLNGHYGVSVYILSNFLSSFPFIVALSFSSGTITYYMVKFRTEISHYFYICLDLTISIAVVESSMMLIASLVPNFLMGIIIGAGYIGIMMLTSGFFRLFPDLPKIFWRIPISYINYGAWGLQGAYKNDMIGLEFDPLVEGDPKLKGEVILTTMLGIELNHSKWWDLAAVLLILLLLKFLFFFVLKFKEQASPFFRTLYGKKALQWIEKRPSFRKAPSFPSRRHHTLHSLSSQEGLSSPFR* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00433 698 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 280 IPR003439 GO:0005524
Pte8g00433 698 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 27 662 - -
Pte8g00433 698 FunFam ABC transporter G family member 11 29 274 - -
Pte8g00433 698 Pfam ABC-2 type transporter 237 295 IPR043926 GO:0140359
Pte8g00433 698 Pfam ABC transporter 58 207 IPR003439 GO:0005524
Pte8g00433 698 CDD ABCG_EPDR 32 262 - -
Pte8g00433 698 Pfam ABC-2 type transporter 376 585 IPR013525 GO:0016020|GO:0140359
Pte8g00433 698 Gene3D - 25 274 IPR027417 -
Pte8g00433 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 271 IPR027417 -
Pte8g00433 698 MobiDBLite consensus disorder prediction 681 698 - -
Pte8g00433 698 MobiDBLite consensus disorder prediction 672 698 - -
Pte8g00433 698 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524|GO:0016887
Pte8g00433 698 SMART AAA_5 65 256 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00433 Pte-Chr8 17859610 17865562 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00433 63 249 Calmodulin-binding Proteins AT2G36910 32.212 6.45e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00433 K05681 - qsa:O6P43_013935 973.385