Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00429 ATGTCGTGTTCAATTGCGATGTCGAATTCGCCGGTTTTCTCTCCGTCGTCGTCACTCTTCCTCAACAAGCCCTCCGTGATTTCTTCACCCGTTGAAGCATTGAATTTGACGTTAGCTCATCTGAAGACTACTACATCTTCTGCTTCAACCGCGTCGATTTCTTCTCCATCTGCTTCTGGTTCTGCGCCTACTTCGCCTTCATCGCCTTTTAGGCTCCGGGTACCGAAAACGACGAGTGGGCTTTCTAATTCAGCTTCGCTATCGGTTCCCAGTTTGAGTTTGCCTTCCCCGCTGACAACAACGACAACGTCGCCTAATTCGACTGTGTTGAAGAGAAAGAGGCCTACTAGGATTGATATTCCCGTGGCCTCTTTGAGTTTCCCCCTACTTGCGACTCCTTCTCCAGCGACGAAGGATGCTTTGGAGGTTGAGGGAGACGGGTATTCTGTGTTTTGCAAAAGAGGAAGGAGGGAATCTATGGAGGATCGGTACTCTGCCGCTGTTAATCTCCAAGGCAAATCCAAAGAGGCTATTTTTGGTGTATATGATGGACATGGAGGTAGCAAAGCAGCAGAATTTGCTGCACAAAACTTAGAAAAGAACATCTTGGGTGAAGTATCAAGGGGAAATGAATATGATATTGAGGAAGCAGTGAAGCAAGGATACCTAACCACTGATTCTGAGTTTCTAAAAACGGATCTTCGTGGTGGCACATGCTGTGTGACTGCATTGATTAGTAATGGTAACCTTATAGTGTCCAATGCTGGTGATTGTCGCGCCGTTATTTGCAGAGGAGGTGTTGCAGAAGCCCTCACATCGGATCACCGGCCTTCAAGGGAAGATGAAAGGAACCGAATTGAGACTCTGGGTGGCTATGTCGATTTATGCCACGGTGTTTGGAGAATCCAGGGATCCCTTGCTGTATCTAGAGGAATTGGTGATCAACACCTCAAGCGATGGGTTATAGCTGAGCCTGAAACAAAAGTTGTCAAAATAGAAGAATCATGCGAGTTTTTGATCTTAGCTTCAGATGGATTGTGGGATAAGGTTGGCACTCAGGAAGCAGTAGATATTGTCCGTCCATGGTGTGGAAGAAGAGATAGTAGACCAGAAGGCCTGGTTGCCTGCAAAAGACTGGTGGATTTGTCCATTGCGCGCGGCGCAGTGGATGATATTAGTGTTATGCTAATCCAATTGTCGCAATACATTTGA 1212 0.4678 MSCSIAMSNSPVFSPSSSLFLNKPSVISSPVEALNLTLAHLKTTTSSASTASISSPSASGSAPTSPSSPFRLRVPKTTSGLSNSASLSVPSLSLPSPLTTTTTSPNSTVLKRKRPTRIDIPVASLSFPLLATPSPATKDALEVEGDGYSVFCKRGRRESMEDRYSAAVNLQGKSKEAIFGVYDGHGGSKAAEFAAQNLEKNILGEVSRGNEYDIEEAVKQGYLTTDSEFLKTDLRGGTCCVTALISNGNLIVSNAGDCRAVICRGGVAEALTSDHRPSREDERNRIETLGGYVDLCHGVWRIQGSLAVSRGIGDQHLKRWVIAEPETKVVKIEESCEFLILASDGLWDKVGTQEAVDIVRPWCGRRDSRPEGLVACKRLVDLSIARGAVDDISVMLIQLSQYI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00429 403 CDD PP2Cc 147 399 IPR001932 -
Pte8g00429 403 SMART PP2C_4 137 397 IPR001932 -
Pte8g00429 403 MobiDBLite consensus disorder prediction 47 109 - -
Pte8g00429 403 ProSiteProfiles PPM-type phosphatase domain profile. 147 399 IPR001932 -
Pte8g00429 403 Gene3D - 147 402 IPR036457 -
Pte8g00429 403 FunFam probable protein phosphatase 2C 25 140 402 - -
Pte8g00429 403 ProSitePatterns PPM-type phosphatase domain signature. 178 186 IPR000222 GO:0043169
Pte8g00429 403 PANTHER PROTEIN PHOSPHATASE 2C 104 398 IPR015655 GO:0004722|GO:0006470
Pte8g00429 403 Pfam Protein phosphatase 2C 148 392 IPR001932 -
Pte8g00429 403 SUPERFAMILY PP2C-like 147 400 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00429 Pte-Chr8 17358076 17360581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00429 1 404 PP2C-type Phosphatase Gene Family AT2G30020 61.098 5.75e-164 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00429 K17506 - jre:109002354 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00429 8 17358076 17360581 Pte8g00429 8 17358076 17360581 RCT