Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00418 ATGGCTGCATCTCCGATATCGGCTTGGACACCACTTATGAATGTCCCCTCTACCGTTTCCCGGACTGTAGGTTATCGTGCCCCCGAGGTGATCGAGACTCGTAAGCATACACACAAATCAGATGTTTATAGCTTTGGCGTCCTCCTCCTTGAGATGCTTACTGGTAAAGCTCCTCTACCATCTCCAGGACGTGATGACGTTGTTGATCTCCCTAGGTGGGTTCAGTCTGTCGTAAGAGAAGAATGGACAGCTGAGGTTTTCGATGTAGAGTTGATGATGGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAAATTGCCATGGCATGTGTGGCAAGAATGCCGGATATGAGAACCCAATATGGATGA 375 0.472 MAASPISAWTPLMNVPSTVSRTVGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPLPSPGRDDVVDLPRWVQSVVREEWTAEVFDVELMMGTKTLKKKWCKCCKIAMACVARMPDMRTQYG* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00418 124 Gene3D Transferase(Phosphotransferase) domain 1 6 123 - -
Pte8g00418 124 SUPERFAMILY Protein kinase-like (PK-like) 15 120 IPR011009 -
Pte8g00418 124 Pfam Protein kinase domain 17 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00418 124 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 19 121 - -
Pte8g00418 124 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00418 Pte-Chr8 15994012 15994386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00418 10 120 Receptor kinase-like Gene Family AT5G58300 68.468 1.59e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte8g00418 Pkinase 4.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00418 - - tcc:18591104 175.252