Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00404 ATGTATGGCAGAAAGGCATGTCAACTGGTGAAAGAATTTGCAAGGGGAGAGAAGGGTCAGATTATGCCTTATAATAGTGACCTCTTCGATCAAGTTATTGCAGAATGCAATCAACACCACCTCGAACTTCAGTCTTTGATAAGAAAAATGCAAGAAGAAGGACTAGAGGTCCAGACAGCTAGAAATGCAGACCACTATGGAGCACTCATTCATCACCTTGCTCTAGTTCGCAACAAACGCTGTCTAATGGCATATGTGCTTAGTCATTCAGAGGAAGATTACTTCAAGAAGCATTCTGCTGCCCTGAAGTCATACATGTCAAAAATGGAACTTGATCTGACAGTGGATATGGTACCACCAAAAGATCCTTATATCCAAGTTAGGGTTCTTGATGAAATAGGGGAAGGAATAGTTCTAAGTGATGATAAGACTGCCAATTTTGCTCTCCACTCGATGCACTTCCTCAAGCGAACTGATGCTGAGCAATTTATCTCAAGGGGATTAATGGAAGAGCTCACAGGCTGA 525 0.421 MYGRKACQLVKEFARGEKGQIMPYNSDLFDQVIAECNQHHLELQSLIRKMQEEGLEVQTARNADHYGALIHHLALVRNKRCLMAYVLSHSEEDYFKKHSAALKSYMSKMELDLTVDMVPPKDPYIQVRVLDEIGEGIVLSDDKTANFALHSMHFLKRTDAEQFISRGLMEELTG* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00404 174 SUPERFAMILY GINS helical bundle-like 1 121 IPR036224 -
Pte8g00404 174 CDD GINS_A_psf1 3 111 IPR005339 GO:0000811|GO:0006260
Pte8g00404 174 PANTHER PARTNER OF SLD5 1 86 IPR005339 GO:0000811|GO:0006260
Pte8g00404 174 Coils Coil 33 53 - -
Pte8g00404 174 CDD GINS_B_Psf1 123 172 - -
Pte8g00404 174 Gene3D - 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00404 Pte-Chr8 14741023 14744311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00404 1 175 Core DNA Replication Machinery Family AT1G80190 63.547 4.87e-89 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00404 K10732 - qsa:O6P43_027860 305.064