Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00395 ATGTTGGACTACGAATGGGGCAACCCATCAACCATAATTCTCACTGGGAACGAAGAAGATGAAACGACGCACCATGAAGATTCAGACCAAGCTCACCGCCAAATTTTCGACCATTATTCTTCTCAATCTCACACCTTGCTACCTGACCATTTTCTTTCTCACCATCAACCTTCACATGACACCCACCCGACGAACACTTTCTCTCATCACCATAACCACCATCACCATCATCATCACTCGTATAATCCTCAAGCTCACAACCCTATTCACCATTCACTCTTTGATCCACGCGCCTTTACCGGCGCGTCTTCTGCGTCCTACCCACCACCACTGCCACCAACCCCACAACCGCACAACTCCTTGCTCTCTTTAGACCCACTTTTTGTTGTTCCTAAGACTGAGGACTTTACAGCTAATAGTACCAGCAGCAACACAAGACTTGGTCTCAACTTAGGTGGCCGTACCTACTTCTCCACCGATGATGACTTTGTCAACCGTCTCTACCGCCGGTCTAGAGCCGTTGAGCCCGGTTCATCTTCTTCTTCCAACTCACCCAAGTGTCAAGCTGAAGGATGCAATGCCGATCTCTCAAACGCTAAACACTACCATAGAAGACACAAAGTCTGTGAGTTTCACTCCAAGGCTGCTACTGTCATTGCTGCCGGGTTGACTCAGCGATTTTGTCAGCAATGTAGCAGATTCCATCTTCTTGCTGAGTTTGATAATGGCAAACGAAGCTGCAGAAAAAGGTTGGCAGATCATAATCGACGAAGGCGAAAAAATCAGCAGCAACCAAACCAAGAAAACCAAAAACCTCAGCAGGACAATGCACCCAATTTAATTTCAAGATCTCAATCGGACCCGGCTGGGATTTACTCATCATCGGTGACAGTGGCGGTGTCCCCGCCGGATTATTTCAGACCAAGACCATTTCAAAGCACAAGTTCTTCAACGACGACATCAACAAGCTCACCATTTTTCTCAAGTGGGTGCTGA 996 0.4739 MLDYEWGNPSTIILTGNEEDETTHHEDSDQAHRQIFDHYSSQSHTLLPDHFLSHHQPSHDTHPTNTFSHHHNHHHHHHHSYNPQAHNPIHHSLFDPRAFTGASSASYPPPLPPTPQPHNSLLSLDPLFVVPKTEDFTANSTSSNTRLGLNLGGRTYFSTDDDFVNRLYRRSRAVEPGSSSSSNSPKCQAEGCNADLSNAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLAEFDNGKRSCRKRLADHNRRRRKNQQQPNQENQKPQQDNAPNLISRSQSDPAGIYSSSVTVAVSPPDYFRPRPFQSTSSSTTTSTSSPFFSSGC* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00395 331 Gene3D - 177 248 IPR036893 GO:0003677|GO:0005634
Pte8g00395 331 FunFam Squamosa promoter-binding-like protein 14 178 248 - -
Pte8g00395 331 MobiDBLite consensus disorder prediction 308 331 - -
Pte8g00395 331 Pfam SBP domain 187 260 IPR004333 GO:0003677
Pte8g00395 331 MobiDBLite consensus disorder prediction 68 84 - -
Pte8g00395 331 MobiDBLite consensus disorder prediction 49 120 - -
Pte8g00395 331 SUPERFAMILY SBT domain 185 264 IPR036893 GO:0003677|GO:0005634
Pte8g00395 331 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 75 317 IPR044817 GO:0003677
Pte8g00395 331 ProSiteProfiles Zinc finger SBP-type profile. 184 261 IPR004333 GO:0003677
Pte8g00395 331 MobiDBLite consensus disorder prediction 265 300 - -
Pte8g00395 331 MobiDBLite consensus disorder prediction 253 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00395 Pte-Chr8 13880790 13882813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00395 1 234 SBP-box Gene Family AT1G02065 47.451 1.48e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte8g00395 SBP 4.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00395 - - qsa:O6P43_027002 362.073