Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00387 ATGGATTCACAGGAGGCCTCCATTAGTATCTTAGACAATGGGGATCACCTCCAAAAGACCACTGGTTTCATCAAACAGACATGGAATGGCGCGAAGAAAATATCACAAAACATGACATCGTCCATTGTAAGAAAGAGCTCGGATCCTATTCTCGCGACTCAGGTTCGGTTCCAAATGCTTAGAGATTTCGTGACCAACATGCAAGAGGTCATCCTTGGCACTAAGCTCGTGGTTCTTTTTCCAGCAATACCTCTTGCAGTTTTGGCAGACTCTTATAATTTTGGAAGACATTGGATTTTTGCACTGAGCTTGCTTGGACTCACCCCACTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTTTACTGGTCCAACGGTCGGAGGACTTCTGAATGCAACATGTGGTAATGCAACGGAGCTGATTATAGCATTTTTTGCTCTTCACCAGAAAAAGATAAATGTCGTGAAGCTCTCTTTATTGGGTTCTATTCTCTCCAACCTTCTTCTGGTTCTTGGCACTTCACTTCTTTGTGGAGGTTTGGCTAATCTGAAGAAGGAACAAAAATACGATAGAAAACAAGCTGATGTAAATTCACTGCTTCTTTTTCTGGGGTTGCTGTGTACCATGCTGCCATTGATGTTCAAATATGCCTTATCAGCAGACATGTATCCCACTGCCAGTTATACCCTACAATTGTCAAGAGCAAGTAGCATTCTCATGCTTGTAGCCTATATTTCATACATCATCTTCCAACTCAAAACTCATCGCCAGTTGTTTGATTCCCAACAGGGTGAAGAAAATGAAGAAGGAGAAGAAGATAAACCAGTAATTGGATTCTGGAGTGCATTTAGCTGGTTAATTGGTATGACAACTATTATTTCTGTGCTATCCGAGTATGTTGTTGGCACCATCGAGGCTGCATCAGATTCTTGGGGCATATCCGTAAGCTTCATCGGCATAATTTTGCTGCCAATAGTGGGGAATGCCGCTGAACATGCAGGATCAATTATTTTTGCCTTTAAGAACAAGTTGGATATATCTCTGGGTGTAGCTTTGGGCTCTGCAACCCAAATTTCTATGTTTGTGGTTCCACTGAGTGTAATTGTTGCATGGATTATGGGTATCGATATGGACCTCGATTTTAATCTCCTCGAGACTGCCTCTCTCGCTTTCACTATACTTATTACAGCTTTCACTTTGCAGGATGGAACTTCTCACTACATGAAGGGTTTGATTCTTTTTCTTTGCTACATTGTCATTGCTGCATGTTTTTTCATGAACAAATCTCCACCAAGTGCTTACATCAATTAG 1320 0.4167 MDSQEASISILDNGDHLQKTTGFIKQTWNGAKKISQNMTSSIVRKSSDPILATQVRFQMLRDFVTNMQEVILGTKLVVLFPAIPLAVLADSYNFGRHWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIAFFALHQKKINVVKLSLLGSILSNLLLVLGTSLLCGGLANLKKEQKYDRKQADVNSLLLFLGLLCTMLPLMFKYALSADMYPTASYTLQLSRASSILMLVAYISYIIFQLKTHRQLFDSQQGEENEEGEEDKPVIGFWSAFSWLIGMTTIISVLSEYVVGTIEAASDSWGISVSFIGIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLSVIVAWIMGIDMDLDFNLLETASLAFTILITAFTLQDGTSHYMKGLILFLCYIVIAACFFMNKSPPSAYIN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00387 439 Gene3D - 127 268 IPR044880 -
Pte8g00387 439 Gene3D - 277 430 IPR044880 -
Pte8g00387 439 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016020|GO:0055085
Pte8g00387 439 Pfam Sodium/calcium exchanger protein 285 426 IPR004837 GO:0016020|GO:0055085
Pte8g00387 439 NCBIfam calcium/proton exchanger 81 428 IPR004798 GO:0006816|GO:0015369
Pte8g00387 439 FunFam Vacuolar cation/proton exchanger 127 272 - -
Pte8g00387 439 FunFam Vacuolar cation/proton exchanger 273 429 - -
Pte8g00387 439 NCBIfam calcium/proton exchanger 62 428 - -
Pte8g00387 439 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 37 432 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00387 Pte-Chr8 12937878 12944447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00387 9 438 Antiporters AT2G38170 61.751 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00387 K07300 - qsa:O6P43_014038 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00387 8 12937878 12944447 Pte8g00387 8 12937878 12944447 RCT