Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00375 ATGGACCCCAGGTTCCCAACCGGAAGGTCGCCGTCGATGGGATCGGACATAGACCAGATGCCAGAGATCCCACAACGAGGTACTCACCACCGGAGGTCTCACTCTGATACGTCCTTCCGTTTCGTCGCCTCCAACCTCGATGACCTTCTCTTCTTCGACGCTTCTGACTTTAACTTCTCTGACTTCGCTTCCCCTACAACTCTAACACCGACACCCGTTGACATCTCAGCTACTCGAGACAATCCAACGGTGGGTGACTCACCTGTCACCTCCAAGTCTTATATGTCTTCTGATGAGTCCACCGGTCAACCCCTGTCCAATCCGGGTCAGACCCAGCCGCCCCTCGGTCACCTCCGTAGCCTCTCAGTGGACTCAGATTTCTTCGAGGGTTTATCTCTCAACGATGGGCTTTCCGGGAAATTTTCAGGTGCGAAGAGGACTGCCATTCACAGGCACAGCAGTTCCATCGATGGAACAACCTCCATGACAGCTTCGCTCGAAGCCGAGTCATCCATGGGGCTTGTTGTTGACAGTGCAAAGAAGGCCTTGGGCTCTGACAAACTCGCGGACCTTGCTTTGGTTGATCCCAAGAGAGCCAGAAGGATACTTGCAAATAGGCAATCTGCTGCACGATCTAAAGAGCGAAAAATTCGCTACACAAGTGAGCTTGAAAGGAAGGTTCAGACTATTCAGAGTGAAGCAACCACTCTTTCCGCTCAAGTCACCAAGTTGCAGAGGGACACAAATGGTTTGACTGCTGAAAATAAGGAGCTCAAATTGCGGTTAGAAGCCATGAAGCAACAAGCAAAGCTCAAAGATGCTTTGAATGATGCACTGAGGGAAGAACTGCAACACCTCAAAATATTAGCTGGTCGTGTTGCTGCAGTCAGTGGAAATCTTCTAAATGGGGGTTTACCCCCACAACTTTCTTCGTTCCAGACTGACTCACGTCAACTCGGCAATTCCCAAGGCCAGCAAGTCATTCAACAAGCAGGTGGTTTAAGCCCTTTGTGGTCCTCTGACAATCAGGGATTCAACAGGCAGCCCCAGCCGAGCATTTTGAATTCCAAAAAGAGGACTAATTAG 1086 0.5037 MDPRFPTGRSPSMGSDIDQMPEIPQRGTHHRRSHSDTSFRFVASNLDDLLFFDASDFNFSDFASPTTLTPTPVDISATRDNPTVGDSPVTSKSYMSSDESTGQPLSNPGQTQPPLGHLRSLSVDSDFFEGLSLNDGLSGKFSGAKRTAIHRHSSSIDGTTSMTASLEAESSMGLVVDSAKKALGSDKLADLALVDPKRARRILANRQSAARSKERKIRYTSELERKVQTIQSEATTLSAQVTKLQRDTNGLTAENKELKLRLEAMKQQAKLKDALNDALREELQHLKILAGRVAAVSGNLLNGGLPPQLSSFQTDSRQLGNSQGQQVIQQAGGLSPLWSSDNQGFNRQPQPSILNSKKRTN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00375 361 CDD bZIP_plant_RF2 198 247 IPR044759 GO:0003700|GO:0006355
Pte8g00375 361 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 13 331 - -
Pte8g00375 361 Gene3D - 196 249 - -
Pte8g00375 361 MobiDBLite consensus disorder prediction 68 118 - -
Pte8g00375 361 MobiDBLite consensus disorder prediction 335 361 - -
Pte8g00375 361 Pfam bZIP transcription factor 197 245 IPR004827 GO:0003700|GO:0006355
Pte8g00375 361 Coils Coil 227 282 - -
Pte8g00375 361 SUPERFAMILY Leucine zipper domain 197 248 IPR046347 GO:0003700|GO:0006355
Pte8g00375 361 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 258 IPR004827 GO:0003700|GO:0006355
Pte8g00375 361 FunFam probable transcription factor PosF21 196 249 - -
Pte8g00375 361 SMART brlzneu 193 257 IPR004827 GO:0003700|GO:0006355
Pte8g00375 361 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00375 Pte-Chr8 12378364 12382428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00375 8 327 bZIP Transcription Factor Family AT1G43700 48.802 2.76e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte8g00375 bZIP_1 9.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00375 K20557 - qsa:O6P43_004198 337.421