Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00367 ATGATTTTTGAGGGTTGCAACTGCATTGATCCCCAGTGGCCTGCAGATGATTTATTGATGAAATACCAATATATTTCAGATTTCTTCATTGCTCTTGCTTATTTCTCTATTCCATTAGAGCTTATCTACTTTGTGAAGAAATCAGCTGTTTTTCCATACAGATGGGTACTAGTTCAGTTTGGTGCTTTCATTGTTCTATGTGGAGCGACACATCTGATTAACTTATGGACATTTACCACACATACAAGAACCGTGGCAGTAGTAATGACCACTGCTAAGGTTTTAACTGCTGTGGTGTCATGTGCAACTGCTCTCATGCTTGTGCATATAATTCCAGATCTATTGAGTGTCAAAACTAGGGAACTATTCTTGAAGAACAAGGCCGCAGAGCTTGACAGAGAAATGGGCATCATTCGTACTCAGGAAGAAACAGGGAGACATGTCAGGATGCTTACTCATGAAATCAGAAGTACCCTTGATCGACAAACAATACTCAAAACAACACTTGTTGAACTCGGTAGGACTTTAGGCTTGGAGGAATGTGCATTATGGATGCCGACACGTTCGGGATTGGAGCTTCAGCTTACTTATACTTTGCGGCAGCAGAATCCTGTTGGTTATACTGTACCCATCCATCTTCCTGTGATTAATCAAGTATTCAACACAAATCGTGCTATAAAAATATCGCCTAATTGCCCTGTGGCCAGACTACGGCCTTTTGCGGGAAAATGCATGCCTGGTGAGGTAGTTGCCATCCGGGTGCCTCTTTTAAATCTCTCAAATTTCCAAATTAATACATGGCCAGAGCTTTCAACAAGAAGCTATGCTTTGATGGTATTGATGTTGCCCGCGGATAGTGCTAGGCAGTGGCATGTCTATGAGTTGGAATTAGTTGAAGTAGTTGCTGATCAGGTAGCAGTTGCTCTTTCACATGCAGCAATCTTGGAAGAGTCAATGAGAGCGAGAGATCTTCTTATGGAGCAGAACATTGCCCTGGATCTTGCCAGGAGAGAAGCAGAAACAGCAATCCGTGCCCGTAACGATTTTTTGGCAGTTATGAACCATGAGATGAGGACTCCCATGCATGCAATAACTGCACTCTCATCACTACTTCAAGAAACAGATTTGACACCTGAACAGCGTTTGATGGTTGAAACTATTTTGAAAAGTAGTAATCTACTTGCTACTCTAATTAATGATGTATTAGATCTTTCAAAACTTGAAGATGGCAGTCTTCAACTTGATAATGTAACTTTTGACCTCCATGCTCTATTTAGAGAGGTCCTTAACTTAATTAGGCCTGTTGCTTCTGTCAAAAAGCTGTCTGTGACTTTAAATTTAGCTCCTGACTTGCCAATTTATGCTGTTGGTGATGAAAAGCGCCTCATGCAGACCATTCTAAATGTTGTTGGTAATGCTGTAAAATTTTCTAAAGAGGGAAGCATATGTTTAACTATTTCTCTTGTGAAGTCGGAGGCTTTGAGAGATTCTCTAGCTCCCGATTTTTATCCTGTGCATAGTGATGGCCACTTCTATTTGCGTGTACAGGTAAAAGACACAGGATTGGGAATTAACCCTCAAGATATTCCAAAATTGTTCACAAAATTTGCACAAACACAGCTAGCAACTAGAAATTCTGCTGGAAGTGGGCTAGGCCTTGCAATTTGTAAAAGGTTTGTGAACCTCATGGGAGGTCAAATTTGGATTGACAGTGAAGGTATTGGCAAGGGCTGTACAGCTACCTTCATTGTAAAACTTGGTATTCAAGAACGACCAAATGATTCTAAGATCCCTTTTGTGCATAAACTTTCTGCAAATAATGGCCAGGCAAACTTCACAGGACTAAAAGTTCTTCTTGTGGATGATAATGGGGTGAGCAGGACAGTTACAAAGGGTCTCCTTATTCATCTAGGATGCGATGTAACGACTGCAAGCTCAAGTGAAGAGTGCCTGCGTGTTGTATCTCTGGAACACAAGGTGGTCTTTATGGATGTGTGTATGTCAGGGATGGATGGTTTTGAGCTTGCAATGCGTATACAAGAAAAGTTCACTAAGCGCCAGGACAGGCCACTTATAGTTGCCCTTACTGGTAATGCTAATAAGGTAACAAAGGATAACTGCATGAGGGTACGCATGGATGGACTTGTATTGAAGCCTGTTTCTGTTGATAAAATGAGAAATGTCTTATTGGAGCTTCTAGAGCACAAGTAA 2211 0.4125 MIFEGCNCIDPQWPADDLLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTTHTRTVAVVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGIIRTQEETGRHVRMLTHEIRSTLDRQTILKTTLVELGRTLGLEECALWMPTRSGLELQLTYTLRQQNPVGYTVPIHLPVINQVFNTNRAIKISPNCPVARLRPFAGKCMPGEVVAIRVPLLNLSNFQINTWPELSTRSYALMVLMLPADSARQWHVYELELVEVVADQVAVALSHAAILEESMRARDLLMEQNIALDLARREAETAIRARNDFLAVMNHEMRTPMHAITALSSLLQETDLTPEQRLMVETILKSSNLLATLINDVLDLSKLEDGSLQLDNVTFDLHALFREVLNLIRPVASVKKLSVTLNLAPDLPIYAVGDEKRLMQTILNVVGNAVKFSKEGSICLTISLVKSEALRDSLAPDFYPVHSDGHFYLRVQVKDTGLGINPQDIPKLFTKFAQTQLATRNSAGSGLGLAICKRFVNLMGGQIWIDSEGIGKGCTATFIVKLGIQERPNDSKIPFVHKLSANNGQANFTGLKVLLVDDNGVSRTVTKGLLIHLGCDVTTASSSEECLRVVSLEHKVVFMDVCMSGMDGFELAMRIQEKFTKRQDRPLIVALTGNANKVTKDNCMRVRMDGLVLKPVSVDKMRNVLLELLEHK* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00367 736 CDD REC_ETR-like 615 729 - -
Pte8g00367 736 Gene3D - 410 593 IPR036890 -
Pte8g00367 736 SUPERFAMILY CheY-like 611 734 IPR011006 -
Pte8g00367 736 Pfam His Kinase A (phospho-acceptor) domain 346 410 IPR003661 GO:0000155|GO:0007165
Pte8g00367 736 PRINTS Bacterial sensor protein C-terminal signature 547 565 IPR004358 GO:0016310|GO:0016772
Pte8g00367 736 PRINTS Bacterial sensor protein C-terminal signature 531 541 IPR004358 GO:0016310|GO:0016772
Pte8g00367 736 PRINTS Bacterial sensor protein C-terminal signature 513 527 IPR004358 GO:0016310|GO:0016772
Pte8g00367 736 FunFam Ethylene response sensor 138 310 - -
Pte8g00367 736 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 457 586 IPR003594 -
Pte8g00367 736 FunFam Ethylene receptor 1 312 408 - -
Pte8g00367 736 Pfam GAF domain 160 309 IPR003018 GO:0005515
Pte8g00367 736 CDD HATPase_EvgS-ArcB-TorS-like 462 586 - -
Pte8g00367 736 Gene3D - 311 409 - -
Pte8g00367 736 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 399 586 IPR036890 -
Pte8g00367 736 Coils Coil 736 736 - -
Pte8g00367 736 ProSiteProfiles Response regulatory domain profile. 616 733 IPR001789 GO:0000160
Pte8g00367 736 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 4 735 - -
Pte8g00367 736 SMART REC_2 615 729 IPR001789 GO:0000160
Pte8g00367 736 CDD HisKA 343 406 IPR003661 GO:0000155|GO:0007165
Pte8g00367 736 SMART gaf_1 160 319 IPR003018 GO:0005515
Pte8g00367 736 FunFam Ethylene receptor 609 736 - -
Pte8g00367 736 FunFam Ethylene receptor 1 410 591 - -
Pte8g00367 736 SMART HKATPase_4 457 590 IPR003594 -
Pte8g00367 736 ProSiteProfiles Histidine kinase domain profile. 352 590 IPR005467 -
Pte8g00367 736 SMART HisKA_10 345 410 IPR003661 GO:0000155|GO:0007165
Pte8g00367 736 Pfam Response regulator receiver domain 617 728 IPR001789 GO:0000160
Pte8g00367 736 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 331 411 IPR036097 GO:0000155|GO:0007165
Pte8g00367 736 PIRSF Ethylen_sen_hybr_HK 2 736 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Pte8g00367 736 Gene3D - 138 310 IPR029016 -
Pte8g00367 736 SUPERFAMILY GAF domain-like 162 312 - -
Pte8g00367 736 Gene3D - 609 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00367 Pte-Chr8 10687815 10695015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00367 3 734 Miscellaneous Gene Families AT1G66340 80.790 0.0 1216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte8g00367 GAF 4.5e-15 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00367 K14509 - qsa:O6P43_029964 1248.8