Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00358 ATGGAAGCAAACAAAGAAGAAGCTTTCAAAGCTATACAAATTGCCGAAAATCGATTTGCTCAGAGAGATTTTGCAGGTGCAAAGAGTTATGTGTTGAAGGCCAAAAAACTATGTCCAGGATTGGAGGGTATACCTCAAATGGTTGCCACTTTTGATGTATATGGAGCTTCTGAAGCTAAATTTAATGGTGAAACAGATTATTATGCAGTTCTGGGCTTGGATCCTTCTGCTGATAGACAAACTGTGAAGAGGCATTACAAGAAGATGGCTATGATGCTCCATCCTGATAAAAATAGATGCGTTGGAGCGGATGGAGCTTTTAAGCTTGTGTCTGAGGCCTGGAATTTGTTGTCAGATAGGGCTAAGAGAAGCTCTTATGATCTAAAGAGAAATGCACATTTTTCTGCAGGATTTACTAACTCGTATTTCACCTCTGTCCATGCTACTGATGTTACAAGCTATAACACTCGTTCCAATTTGTCAACCCGTCAAGTGAGGCTTGATTCTTTCTGGACTATTTGCACCTCTTGTAACATTCAGTATGAGTATTTGCGCAAATATGTGAACAAGACGCTTTCTTGTAAAAACTGTCGCGGTACCTTCATTGCTGTGGAAACTGGAGCACCCCCAGCAAATGGCTCTTTCTCATGGTCCTGTATGCCGAGTAATGGGTATGGAAGTCATTCATATGATGGGGTTGCACATTTTCCAAACAACGTCACCTTCTGTAATGGCAATCGGTTCTCAGGATACCATTCTGGACATGGTTATGAATATGTCTCAAACAATTCATTTCAGTGGACTGGAACACCTGCTGGTGTTATTTGCCAGAATGGGCAATCTACTCTGCCTGCTGATTCTCTTTGCTTCTCCAATGGAGGCATGAAGAAAGGAAACGATAAGGTTAATTCTGGATCTAACAGAAAAACTTCTGCCTCTGAGACTACAGTTCCTGCTAGTTCTAACATGATGTTTGCCAATGATTGGTCACAGCAAGCTAAGCCCTCTCAACCTGATAAGAGAAGGAAAGTTGTTCTGGGTGCCACTTTTAGGAATGGTAATGATGAGAAGCGATCTAAATCTTCTTCTCAAGTTCCCATAACTAATGGAAACGTGAGTGTTGGCTCTATCCACAAGCTTTTATCAACACCAGAAGTTCAAAATAAGCAATGCACAAGCAGCTCAACTGCACCTGCATTTGATGCAAGAAAGTTGTTGATTGAGAAGGCCAGGACAGAAATTCGAAAAAAGTTAGAAGAGATGAAATTAGCTGCCGCCACTGCCACCACTGCAGTTAAAGAGAAAGAGAAGTCGTTAGGTGAACGAAGTGAAATTGTTAAATGCAAAAGAGAGGTGTCCAGTGCAACAGGTTCTTCTAATCAACAATTGGAGCCTATGAAGACCGATCCAATCTCAATAACTGTCCCTGATTCAGACTTTCATAATTTTGACAATGATAGATTAGAAGAGTGCTTCAAGCCAAAGCAGATATGGGCATTGTATGATGAAGAGGAAGGAATGCCGCGCTTGTATTGTATAATTCGGGAAATCATCTCGGTGAAGCCATTTAATATTCTTGTCACTTACTTGAACTCTAAATCTGATACTGAATTTGGTTTGGTAAACTGGCTTAGCTCTGGTTTTACCAAATCATGTGGGCATTTTAGATCATTTAACACTGATGTTGTTGATCAAGTTAACATTTTCTCTCATGTTTTAAGTCGAGAAAAGGCTGGTAGAGGTGGTTGTGTTCGCATTTACCCTCGAAGTGGAGATGTCTGGGCAGTCTACCGAGATTGGTCACCAGATTGGGATAGTTCAACCCCTGCTGAAGTGAGACACCATTATGAAATGGTAGAGGTTCTTGATGATTACTACGAAGAGATTGGGATTTCTGTTGCCCTCCTTGTCAAGTTAGCTGGATATAAGACAGTATATCGAAGGAGCACAGACAAACATGCTGTCAGGTGGATACCAAAGAGGGAGATGCTAAGGTTTTCACATCAAGTACCATCTTGGTTGCTGACTAAAGAAGCTAGTGATTTGCCAGACAAATGTTGGGATTTGGATCCAGCTGCTACCCCAGATGAGCTCCTACATTCAGAAGGGAAGGCGTCATAG 2121 0.4154 MEANKEEAFKAIQIAENRFAQRDFAGAKSYVLKAKKLCPGLEGIPQMVATFDVYGASEAKFNGETDYYAVLGLDPSADRQTVKRHYKKMAMMLHPDKNRCVGADGAFKLVSEAWNLLSDRAKRSSYDLKRNAHFSAGFTNSYFTSVHATDVTSYNTRSNLSTRQVRLDSFWTICTSCNIQYEYLRKYVNKTLSCKNCRGTFIAVETGAPPANGSFSWSCMPSNGYGSHSYDGVAHFPNNVTFCNGNRFSGYHSGHGYEYVSNNSFQWTGTPAGVICQNGQSTLPADSLCFSNGGMKKGNDKVNSGSNRKTSASETTVPASSNMMFANDWSQQAKPSQPDKRRKVVLGATFRNGNDEKRSKSSSQVPITNGNVSVGSIHKLLSTPEVQNKQCTSSSTAPAFDARKLLIEKARTEIRKKLEEMKLAAATATTAVKEKEKSLGERSEIVKCKREVSSATGSSNQQLEPMKTDPISITVPDSDFHNFDNDRLEECFKPKQIWALYDEEEGMPRLYCIIREIISVKPFNILVTYLNSKSDTEFGLVNWLSSGFTKSCGHFRSFNTDVVDQVNIFSHVLSREKAGRGGCVRIYPRSGDVWAVYRDWSPDWDSSTPAEVRHHYEMVEVLDDYYEEIGISVALLVKLAGYKTVYRRSTDKHAVRWIPKREMLRFSHQVPSWLLTKEASDLPDKCWDLDPAATPDELLHSEGKAS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00358 706 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pte8g00358 706 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pte8g00358 706 PRINTS DnaJ domain signature 122 141 IPR001623 -
Pte8g00358 706 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pte8g00358 706 SMART dnaj_3 65 122 IPR001623 -
Pte8g00358 706 Pfam Domain of unknown function (DUF3444) 472 678 IPR024593 -
Pte8g00358 706 SUPERFAMILY Chaperone J-domain 63 145 IPR036869 -
Pte8g00358 706 Coils Coil 407 427 - -
Pte8g00358 706 Pfam DnaJ domain 66 127 IPR001623 -
Pte8g00358 706 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pte8g00358 706 Gene3D DnaJ domain 63 165 IPR036869 -
Pte8g00358 706 MobiDBLite consensus disorder prediction 348 371 - -
Pte8g00358 706 CDD DnaJ 66 119 IPR001623 -
Pte8g00358 706 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pte8g00358 706 MobiDBLite consensus disorder prediction 297 320 - -
Pte8g00358 706 PANTHER BNAC03G44070D PROTEIN 1 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00358 Pte-Chr8 9885290 9888702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00358 4 203 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.524 4.99e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00358 - - gmx:100788692 924.85