Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte8g00346 | ATGGGTACATCCTCCGGTTCTAATGTCAACCAGGAACCTTCAAAAATGCTTCCTCCTAGACAACAACCACGGGCTGGTGGACTACAAACATCCTTATCTCTAGTTCCGTCAGATGCTCGGCTTTCTCCTGAGGAACCTAGATCAAATTCTGATCATATGCATGAATCTGCAACTGAAAGTGCTAGTTCCAGAGAAACATGGCCTAATGCAGATGTTGTCATAGGAAAGAGGATGGAGAATGGTAAAGAAGGTAATGATGGCCCTGACCAATCAGTCATTCGTCATGTTTCTAGTGCAGATAAAATAACGCTTAGAGACATAGCAAAGGAACCAGTTGACATAATTTCTGAAAAAATGCATCATTTACCTGAAGAGTTTCTAGATGAGCTCAAGAACAGACTTCGAATTATTCTTGAAGGATGGAGTTCTTCACAGCATAAGGAGGAATTCTTTATCATGCAAAAGTTTGTTCAGAGTAGAACTGATTTAACAGCAAAGACATTAATAAGAGCACATCGAGTACAACTTGAGATCATCGTTGCAATTAACACTGGAATCCAGGGATTCTTACATCCTAGTATGAGTCTCTCACAAACCTCTCTTATTGAGATCTTCCTGTACAAGCGTTGCAGAAACTTAGCTTGCCAAAACCAGCTCCCAGCAGATGACTGTACCTGTGAGATATGCAGCAACAGAAATGGATTCTGTAATCTTTGCATGTGTGTGATCTGTAACAAGTTTGACTTCGAAGTTAATACTTGTCGTTGGATTGGCTGCGATCTTTGTTCTCATTGGACTCACACAGATTGTGCTATCCGAGATCGGCTTATTTGTATGGGTCCTTCGGTTAAAAATGGAGGAGGACCAAGTGAAATGGTTTTCAGGTGCCAAGCATGCAATCGAACTTCAGAGTTGCTGGGTTGGGTCAAAGATGTTTTCCAGCATTGTGCACCAGTCTGGGATGGTGAGGCTCTGATGAGGGAACTTGATTTTGTAAGTAGGATCTTTCATGGTAGTGAAGATGCATGGGGTAGGAAACTCTTTTGGAAGTGTGAAGAACTTAAAGATAAAATGAGAAGTGCATTAGTAGATCCAAAATCAGCCTGCAGAGCAATATTGGTGTTTTTCCAAGAGCTTGAAGTTGGCTCTCCAAGGATTCTTGAAAATGGGGAAGGTGGAAGGTTAATTGCTCCACAGGAGGCATGTAATCGAATTGCTGATGTGGTGCAAGAGGCTATACGAAAAATGGAGATGGTGGCTGAAGAGAAGTTGAGGTTGTTCAAGAAAGCACGCTTGGCTCTTGAAGCATGTGACCGTGAACTGGAGGACAAAGCTAGGGAAGCTGCAGAACTCAAATTGGACAGGCAAAAGAAGAAAACACAGATAGAAGAGCTGGAGAAAATTGTGAGACTCAAAACTGCAGAGGCTGATATGTTTCAGTTTAAAGCTAACGAGGCGAAACGAGAGGCAGAGAGGCTACAGAGGATTGCTTTGGCCAAGCAAGATAAATCAGAAGAAGAATATGCTAGCAACTATCTTAAACAGCGGTTGAGTGAGGCAGAGGCAGAAAAGCAGTATCTGTTTGAGAAGATCAAGTTACAAGAGAGTTCTCGTGCATCAGCATCACAGAGTTGTAGTGGTAGTGCTGACCCCTCTCAGATTTTGATGTACTCTAAAATACATGATTTGCTCTACAATGTTTCCTCCAAGACTGACAGCCAGCCAAATGAACGCAATCCTTTCAGGTCACATCAATGA | 1758 | 0.4238 | MGTSSGSNVNQEPSKMLPPRQQPRAGGLQTSLSLVPSDARLSPEEPRSNSDHMHESATESASSRETWPNADVVIGKRMENGKEGNDGPDQSVIRHVSSADKITLRDIAKEPVDIISEKMHHLPEEFLDELKNRLRIILEGWSSSQHKEEFFIMQKFVQSRTDLTAKTLIRAHRVQLEIIVAINTGIQGFLHPSMSLSQTSLIEIFLYKRCRNLACQNQLPADDCTCEICSNRNGFCNLCMCVICNKFDFEVNTCRWIGCDLCSHWTHTDCAIRDRLICMGPSVKNGGGPSEMVFRCQACNRTSELLGWVKDVFQHCAPVWDGEALMRELDFVSRIFHGSEDAWGRKLFWKCEELKDKMRSALVDPKSACRAILVFFQELEVGSPRILENGEGGRLIAPQEACNRIADVVQEAIRKMEMVAEEKLRLFKKARLALEACDRELEDKAREAAELKLDRQKKKTQIEELEKIVRLKTAEADMFQFKANEAKREAERLQRIALAKQDKSEEEYASNYLKQRLSEAEAEKQYLFEKIKLQESSRASASQSCSGSADPSQILMYSKIHDLLYNVSSKTDSQPNERNPFRSHQ* | 586 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte8g00346 | 585 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
Pte8g00346 | 585 | PIRSF | UCP025218 | 1 | 573 | - | - | |
Pte8g00346 | 585 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 160 | 175 | IPR004082 | - | |
Pte8g00346 | 585 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 118 | 140 | IPR004082 | - | |
Pte8g00346 | 585 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 247 | 267 | IPR004082 | - | |
Pte8g00346 | 585 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 502 | 524 | IPR004082 | - | |
Pte8g00346 | 585 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 463 | 483 | IPR004082 | - | |
Pte8g00346 | 585 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 201 | 222 | IPR004082 | - | |
Pte8g00346 | 585 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 320 | 339 | IPR004082 | - | |
Pte8g00346 | 585 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 175 | 190 | IPR004082 | - | |
Pte8g00346 | 585 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Pte8g00346 | 585 | SMART | PHD_3 | 240 | 300 | IPR001965 | - | |
Pte8g00346 | 585 | PANTHER | VERNALIZATION-INSENSITIVE PROTEIN 3 | 37 | 568 | IPR004082 | - | |
Pte8g00346 | 585 | CDD | PHD_OBE1_like | 240 | 299 | IPR047578 | - | |
Pte8g00346 | 585 | MobiDBLite | consensus disorder prediction | 44 | 59 | - | - | |
Pte8g00346 | 585 | Pfam | Coiled-coil region of Oberon | 428 | 564 | IPR032535 | - | |
Pte8g00346 | 585 | Pfam | PHD - plant homeodomain finger protein | 210 | 333 | IPR032881 | - | |
Pte8g00346 | 585 | Coils | Coil | 427 | 503 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte8g00346 | Pte-Chr8 | 9371688 | 9375301 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte8g00346 | 210 | 312 | PHD Gene Family | AT5G57380 | 32.692 | 5.90e-09 | 57.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte8g00346 | - | - | qsa:O6P43_020737 | 956.822 |