Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00345 ATGGCAACATCTGCATGCCAACACTCCACATTTGCTGGCCAGACAGCTTTGAAACAAGGCAATGAGTTTTTCAGGAGGGTCGGTGACATTGGAGGCAGCCGCATTAACATGCGCCGTACAGTGCAAAGTTCTCCCAAAAGCATCTGGTATGGTCCAGACCGTCCGAAGTACTTGGGACCTTTCTCAGAACAAATCCCATCATACCTGACTGGTGAATTCCCTGGTGATTACGGCTGGGACACCGCTGGGTGTGTCTTCCCAGAAGTTCTCTCCAAGAATGGCGTTAAGTTTGGCGAGGCAGTTTGGTTCAAGGCTGGTGCTCAGATTTTCTCTGAAGGTGGTCTTGACTATCTTGGCAATCCAAACCTCATCCATGCTCAGAGCATCCTCGCAATCTGGGCATGTCAAGTGGTGCTCATGGGGTTGATTGAAGGTTACAGAGTTGGAGGGGGCCCTCTCGGTGAAGGGCTTGACCCCATTACCCAGGTGGTGCCTTTGACCCCTCTTGGATTGGCGGATGACCCTGATGCATTTGCTGAATTGAAGGTGAAGGAAATCAAGAATGGAAGATTGGCAATGTTCTCTATGTTTGGTTTCTTCGTTCAGGCCATTGTTACTGGGCAAGGGACCAATTGA 636 0.5016 MATSACQHSTFAGQTALKQGNEFFRRVGDIGGSRINMRRTVQSSPKSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGCVFPEVLSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPITQVVPLTPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGQGTN* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00345 211 Gene3D Chlorophyll a/b binding protein domain 83 211 - -
Pte8g00345 211 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 83 IPR001344 GO:0009765|GO:0016020
Pte8g00345 211 SUPERFAMILY Chlorophyll a-b binding protein 48 209 - -
Pte8g00345 211 Gene3D Chlorophyll a/b binding protein domain 56 82 - -
Pte8g00345 211 Pfam Chlorophyll A-B binding protein 81 203 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00345 Pte-Chr8 9357998 9359210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00345 1 209 Chloroplast and Mitochondria Gene Families AT3G27690 71.429 3.57e-120 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00345 K08913 - twl:119999384 362.073