Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00342 ATGAATTGTCCTTCAGGATTTGTGGTTTTTCTCAGTCTTTCAAGGCAATTATTGAAGATACAGAAGTTGGGTTTTACTAAAATGTCTCTGAATAGCAAACTGTCTGGCGACAGCGTCTCAGCTAGCTTGAAGTCAAGGAAGGGGGGAAAGGAACCCTTGCATGGTTCCAATTCTGTAACAAAATGGAGGAGGAAGCTTTTGTTGCTTTGGCTATTGGGTATTCTTGCTATAAGCAGTGTATGGTTTTTCTTTAGTTCTGGAGTTGGTACTTGGAGAAGAAATGAGAGGATCCTTGAATCGTGTGAAGGGAGAACTCGCTTGTGGCTACAGCACCAATATATAAGCATTAAGTGGCTTCAAGATTTAGCTTCTTTGTTCTCTAACCTAGATCAGGTACTGGGAAGCAGTGGAAATCAGATTTGTGCAGCTTTGTGCAGCTTGTTAAGGCAATTCTGGTGGTGGGTCTTTGTTGCACTGATGATATGCTTCAAAGTAACCGGTTTCCGTCTGAAAGTATTTGGAGATTCAAAGCATGAGCTGGTTCAACTGCAACTAGTCAGCCCCCAGAAACAGCAGCAGCCTGTCACTCTCGAAAAGCATCTACTACAAAAGCCCCAACAAACTCCCATTGGACCTCCAAGAAGTGCTGGAAAATGGAGGAAAATACTCCTAGTTGTTTTTGTCTCATTTGGGGTGATTGGTTCGTTTTGGTTATTTTGGCACTTGAACGCAGATATTAATTTGCGGAGAAAAGAAACACTAACAAGTATGTGCGATGAGAGAGCTAGAATGCTCCAGGATCAGTTTAATGTGAGTATGAACCATGTTCATGCTCTTGCCATTCTAGTTTCAACTTTTCACCATGGGAAACATCCCTCTGCAATTGATCAGAAAACATTTGGTGAATATACTGAGAGGACTGCTTTTGAGAGACCACTTACCAGTGGTGTTGCATATGCCTTAAAAGTTCTTCACCATGAGAGAGAAAACTTCGAGAATCATCATGGATGGACAATAAAGAGAATGGGAACTGAGGACCAGACTCTTGTACATGATTGTATTCCTGGAAAACTGGATCCTGCTCCTATTCAAGATGAATATGCACCTGTTATATTTTCTCAAGAAACTGTTTCACATATTGTATCCATTGACATGATGTCAGGAAAGGAAGATCGTGAGAATATATTGCGAGCAAGGGCATCTGGAAAAGGAGTCTTAACATCTCCATTTAAACTATTGAAGTCCAACCACCTTGGTGTTGTGCTCACATTTGCTGTCTATAGCATTGATCTTCCACGGGAGGCTACCCCAGAACAGCGAATAGAAGCTACAGTGGGGTATCTAGGTGCATCCTATGATGTTCCATCTTTGGTGGAGAAACTTCTGCACCAACTTGCCAGCAAGCAAACAATTGTTGTAAATGTTTATGATACAACGAATGCATCTACACCTATCAACATGTATGGTACAGATGTTACAGACACTGGCCTCCTGCATATAAGTAGCCTCGATTTTGGGGATCCAACGCGGAAGCATGAGATGCACTGCAGGTTCAAGCATAAGCCTGCAGTTCCTTGGACAGCTATAAATGCTTCAGTGGGAGTGCTTGTTATAACATTGCTTCTTGGCGATATCTTTTATGCTGCAATAAGTCGCATAGCAAAAGTAGAAGATGATTATCGTAAGATGATGGAACTCAAAATTCGTGCTGAAGCTGCAGATGTAGCAAAATCTCAGTTTCTGGCAACAGTTTCACATGAAATCCGGACTCCCATGAATGGTGTCCTCGGTATGCTGCAAATGCTGATGGACACTGATCTTGATGCAACACAAATGGATTACGCCCAGACTGCTCATGCTAGTGGCAAAGATCTCATATCGCTTATAAATGAGGTTCTTGATCAGGCTAAGATAGAATCAGGGAGGCTTGAGCTAGAAGCTGTGCCGTTTGACTTGCGTGCTGTTCTAGACAATATTCTGTCTCTTTTCTCAGGCAAATCTGCTGAAAAAGGAATAGAGTTTGCAGTGTACGTATCTAGTCAAGTGCCTCAAGTCATTATCGGTGATCCTGGGCGTTTCCGGCAGATAATTACAAATCTTGTTGCAAACTCCATCAAGTTCACTAATGAAAAAGGACATATTTTTGTCACGGTTCATCTGGCATATGAACTTTTAGAGCCCCCTGAAACTATGGACAAGGTTTTGTGGCAAAGCTTAGACTGGGTTGAAGACATGTCTGACAAAAATTCCAACACATTAAGTGGGCTTCCAGTGGTCAATAGGAAGAAAAGCTGGGAACGCTTTAGAAAAATAAGCAGCATACATCCGATGGTCCAATCTGAAACGATCAGATTGCTTGTAACTATTGAGGATACTGGTGTGGGGATCCCCATTGAAGCACAAAGCCGAATTTTCACACCTTTCATGCAAGCAGACAGTTCGACATCGCGGACATATGGTGGCACTGGAATAGGATTGAGCATCAGTAAATGTTTGGTTGATCTCATGGAAGGTGAAATTGGCTTTGAGAGCGAACCTGGCAAAGGAGCTACTTTTTCATTCACAGGAACTTTCAGGAAAGGAGATTTGACAGCTCTGGTTACAACAAGCCAGCTGTGTGATCCTGCTGCTTTAGAATTTCAAGGACTTAGAGCATTAGTGGTTGATAGAAGTGTGAGAGCAGAGGTCACTCGTTATTACTTGCAGAGGTTGGGGATATCTGCAGATTTACATTTCAGCTTGAATTCAGCCTGCTCTTACTTAAGTAGTCATTGCGACACAAGCTTGTCAACACATCTGTCAATGATCCTCATAGACAGAGACATGTGGGATAAGGAAAGTAGTGTTGTACTGCATAATATCGTAGAAGGCTCCAGGCAAAAAAACATCAGAGGGGATGGAAAAGGTTTCCCAAGGATATATATCTTAGCTAATACAATAACTCCATATGAGCGTGAGCTGAAATCTCTGGGTCATGTAGACGATGTAATAGTAAAACCTCTCCGGCTTAGTAGTTTAATTTCATGCTTCCAAGCCTTGGTTGGAAGTTGTAAGAAGCAACAAGTGAATGGAAAAAAAAAATCAACCCTGGGGAATCTGTTAAAGGGAAAGAAGATATTGGTTGTGGATGACAACATAGTTAACAGAAGAGTCGCAGAAGGAGCTTTGAAAAAATATGGGGCAACTGTGACTTGCGTAGACAGTGGCAAGAAGGCTCTAAATATCCTTAAGCCACCACATGATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGGTTTGAAGCTACAAAACAAATACGATGGCTGGAGAAGGAGGTGAATGAAAAAATAGCAAGTGGGGAGTTATCAGCTGAGGTGTTCATCAATACGAGCTACTGGCACACACCAATATTAGCCATGACGGCGGACGTGATTCAGGCATCAAATGAGAAGTGTATGAAGTGTGGGATGGATGACTATGTTTCCAAGCCTTTTGAGGAAGAACAGCTCTACAATGCAGTTGCACCTTTTTTTGAGTCAGGTTGA 3537 0.4215 MNCPSGFVVFLSLSRQLLKIQKLGFTKMSLNSKLSGDSVSASLKSRKGGKEPLHGSNSVTKWRRKLLLLWLLGILAISSVWFFFSSGVGTWRRNERILESCEGRTRLWLQHQYISIKWLQDLASLFSNLDQVLGSSGNQICAALCSLLRQFWWWVFVALMICFKVTGFRLKVFGDSKHELVQLQLVSPQKQQQPVTLEKHLLQKPQQTPIGPPRSAGKWRKILLVVFVSFGVIGSFWLFWHLNADINLRRKETLTSMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAIDQKTFGEYTERTAFERPLTSGVAYALKVLHHERENFENHHGWTIKRMGTEDQTLVHDCIPGKLDPAPIQDEYAPVIFSQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYSIDLPREATPEQRIEATVGYLGASYDVPSLVEKLLHQLASKQTIVVNVYDTTNASTPINMYGTDVTDTGLLHISSLDFGDPTRKHEMHCRFKHKPAVPWTAINASVGVLVITLLLGDIFYAAISRIAKVEDDYRKMMELKIRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDATQMDYAQTAHASGKDLISLINEVLDQAKIESGRLELEAVPFDLRAVLDNILSLFSGKSAEKGIEFAVYVSSQVPQVIIGDPGRFRQIITNLVANSIKFTNEKGHIFVTVHLAYELLEPPETMDKVLWQSLDWVEDMSDKNSNTLSGLPVVNRKKSWERFRKISSIHPMVQSETIRLLVTIEDTGVGIPIEAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMEGEIGFESEPGKGATFSFTGTFRKGDLTALVTTSQLCDPAALEFQGLRALVVDRSVRAEVTRYYLQRLGISADLHFSLNSACSYLSSHCDTSLSTHLSMILIDRDMWDKESSVVLHNIVEGSRQKNIRGDGKGFPRIYILANTITPYERELKSLGHVDDVIVKPLRLSSLISCFQALVGSCKKQQVNGKKKSTLGNLLKGKKILVVDDNIVNRRVAEGALKKYGATVTCVDSGKKALNILKPPHDFDACFMDLQMPEMDGFEATKQIRWLEKEVNEKIASGELSAEVFINTSYWHTPILAMTADVIQASNEKCMKCGMDDYVSKPFEEEQLYNAVAPFFESG* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00342 1178 Pfam His Kinase A (phospho-acceptor) domain 576 641 IPR003661 GO:0000155|GO:0007165
Pte8g00342 1178 SMART HKATPase_4 688 860 IPR003594 -
Pte8g00342 1178 FunFam Histidine kinase 4 295 522 - -
Pte8g00342 1178 CDD PRTases_typeI 985 1066 IPR000836 -
Pte8g00342 1178 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 688 855 IPR003594 -
Pte8g00342 1178 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 630 855 IPR036890 -
Pte8g00342 1178 CDD REC_hyHK_CKI1_RcsC-like 1039 1171 - -
Pte8g00342 1178 Gene3D - 881 1032 - -
Pte8g00342 1178 PRINTS Bacterial sensor protein C-terminal signature 803 813 IPR004358 GO:0016310|GO:0016772
Pte8g00342 1178 PRINTS Bacterial sensor protein C-terminal signature 844 857 IPR004358 GO:0016310|GO:0016772
Pte8g00342 1178 PRINTS Bacterial sensor protein C-terminal signature 820 838 IPR004358 GO:0016310|GO:0016772
Pte8g00342 1178 PRINTS Bacterial sensor protein C-terminal signature 785 799 IPR004358 GO:0016310|GO:0016772
Pte8g00342 1178 FunFam Histidine kinase 4 548 639 - -
Pte8g00342 1178 SMART REC_2 1037 1171 IPR001789 GO:0000160
Pte8g00342 1178 ProSiteProfiles CHASE domain profile. 291 515 IPR006189 -
Pte8g00342 1178 Pfam CHASE domain 294 488 IPR006189 -
Pte8g00342 1178 SUPERFAMILY CheY-like 880 1014 IPR011006 -
Pte8g00342 1178 SMART CHASE_2 291 490 IPR006189 -
Pte8g00342 1178 PANTHER TWO-COMPONENT HISTIDINE KINASE 191 1168 - -
Pte8g00342 1178 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 563 642 IPR036097 GO:0000155|GO:0007165
Pte8g00342 1178 SMART HisKA_10 576 641 IPR003661 GO:0000155|GO:0007165
Pte8g00342 1178 Gene3D - 242 294 - -
Pte8g00342 1178 Gene3D CHASE domain 295 522 IPR042240 -
Pte8g00342 1178 Gene3D - 640 860 IPR036890 -
Pte8g00342 1178 Pfam Response regulator receiver domain 1039 1171 IPR001789 GO:0000160
Pte8g00342 1178 CDD HATPase_EvgS-ArcB-TorS-like 693 855 - -
Pte8g00342 1178 ProSiteProfiles Histidine kinase domain profile. 583 860 IPR005467 -
Pte8g00342 1178 SUPERFAMILY CheY-like 1034 1173 IPR011006 -
Pte8g00342 1178 CDD HisKA 576 637 IPR003661 GO:0000155|GO:0007165
Pte8g00342 1178 ProSiteProfiles Response regulatory domain profile. 1038 1175 IPR001789 GO:0000160
Pte8g00342 1178 ProSiteProfiles Response regulatory domain profile. 883 1014 IPR001789 GO:0000160
Pte8g00342 1178 Gene3D - 1033 1177 - -
Pte8g00342 1178 Gene3D - 548 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00342 Pte-Chr8 9212897 9221216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00342 143 1176 Miscellaneous Gene Families AT5G35750 65.734 0.0 1357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte8g00342 CHASE 3.9e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00342 K14489 - zju:107406671 1521.14