LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte8g00314	ATGGGTAAGAGGGAGAGAGAAAACCCTTGTGGGGTATGTGGTCACTATCATAAATATGAAGAAGGCGAAGTGTGTTCGATTTGTGGACATCGGATTCCTGATTCTTCTGAGAAAACTTCGATTCAAGTCAGTGCTTTTCCTTCTGAGATTTTGCCGGGTTTTCTTTACTTGGGTAGCTATGATAACGCTTCACGTTCAGAGCTTCTCAAGACTCAAGGGATCTCTCGTATTCTTAATACGGTGCCTTCTTGTCAGAATCTCTACAAGAATTCATTTACTTATCACTGTATCCCCGATGACAGAATCTTACAATTTGATGATGCTAATCAGTTTTTAGAGCAATGTGACACTGAAAAGGCACGTGTTCTGGTGCACTGCATGTCAGGGAGAAGTAGGTCTCCTGCAATTGTAATAGCGTACCTGATGAAGTCCAAAGGATGGAGGCTGACACAAAGTTACCAGTGGGTTAAAGAGCGAAGACCTTCTGTCGAGTTAACCCAAGCTGTATACCAGCAATTACAAGAGTATGAACAGAATATCTTTGGACCAGTGGACGGAAGCACTCCTCTAGTGGCAGGATTGCCTCTAGGAGCAGCTCCTTCATTTAGCTTTGGCTTTGCAAAGAATAATGATCCAGCTCCTAACCCTGCATTCGTCAGTGCTGGAGCAACCTCAATTTTCTCACGCAGTCCACTTGATATCCCTCCTCAAGAGTTTACTTTTGGAGCTGGTCAGAATCTAAGCAATGACATTCAAATGGATAGTTCTTGA	771	0.4332	MGKRERENPCGVCGHYHKYEEGEVCSICGHRIPDSSEKTSIQVSAFPSEILPGFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCIPDDRILQFDDANQFLEQCDTEKARVLVHCMSGRSRSPAIVIAYLMKSKGWRLTQSYQWVKERRPSVELTQAVYQQLQEYEQNIFGPVDGSTPLVAGLPLGAAPSFSFGFAKNNDPAPNPAFVSAGATSIFSRSPLDIPPQEFTFGAGQNLSNDIQMDSS*	257

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte8g00314	256	ProSitePatterns	Tyrosine specific protein phosphatases active site.	124	134	IPR016130	GO:0016311\|GO:0016791
	Pte8g00314	256	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	103	171	IPR000387	GO:0016311\|GO:0016791
	Pte8g00314	256	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	46	182	IPR020422	GO:0006470\|GO:0008138
	Pte8g00314	256	Gene3D	Protein tyrosine phosphatase superfamily	40	183	IPR029021	-
	Pte8g00314	256	CDD	DSP_plant_IBR5-like	47	176	-	-
	Pte8g00314	256	FunFam	Protein-tyrosine-phosphatase IBR5	36	186	-	-
	Pte8g00314	256	SMART	dsp_5	46	179	IPR020422	GO:0006470\|GO:0008138
	Pte8g00314	256	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	47	181	IPR029021	-
	Pte8g00314	256	PANTHER	PROTEIN-TYROSINE-PHOSPHATASE IBR5	1	250	IPR044212	GO:0009734\|GO:0009738\|GO:0033549\|GO:0043407
	Pte8g00314	256	Pfam	Dual specificity phosphatase, catalytic domain	55	178	IPR000340	GO:0008138\|GO:0016311

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte8g00314	Pte-Chr8	7306772	7311643	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte8g00314	1	166	Protein tyrosine phosphatase (PTP) family	AT2G04550	72.781	2.07e-95	276

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte8g00314	K04459		-	zju:107417407	421.779

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