Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00314 ATGGGTAAGAGGGAGAGAGAAAACCCTTGTGGGGTATGTGGTCACTATCATAAATATGAAGAAGGCGAAGTGTGTTCGATTTGTGGACATCGGATTCCTGATTCTTCTGAGAAAACTTCGATTCAAGTCAGTGCTTTTCCTTCTGAGATTTTGCCGGGTTTTCTTTACTTGGGTAGCTATGATAACGCTTCACGTTCAGAGCTTCTCAAGACTCAAGGGATCTCTCGTATTCTTAATACGGTGCCTTCTTGTCAGAATCTCTACAAGAATTCATTTACTTATCACTGTATCCCCGATGACAGAATCTTACAATTTGATGATGCTAATCAGTTTTTAGAGCAATGTGACACTGAAAAGGCACGTGTTCTGGTGCACTGCATGTCAGGGAGAAGTAGGTCTCCTGCAATTGTAATAGCGTACCTGATGAAGTCCAAAGGATGGAGGCTGACACAAAGTTACCAGTGGGTTAAAGAGCGAAGACCTTCTGTCGAGTTAACCCAAGCTGTATACCAGCAATTACAAGAGTATGAACAGAATATCTTTGGACCAGTGGACGGAAGCACTCCTCTAGTGGCAGGATTGCCTCTAGGAGCAGCTCCTTCATTTAGCTTTGGCTTTGCAAAGAATAATGATCCAGCTCCTAACCCTGCATTCGTCAGTGCTGGAGCAACCTCAATTTTCTCACGCAGTCCACTTGATATCCCTCCTCAAGAGTTTACTTTTGGAGCTGGTCAGAATCTAAGCAATGACATTCAAATGGATAGTTCTTGA 771 0.4332 MGKRERENPCGVCGHYHKYEEGEVCSICGHRIPDSSEKTSIQVSAFPSEILPGFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCIPDDRILQFDDANQFLEQCDTEKARVLVHCMSGRSRSPAIVIAYLMKSKGWRLTQSYQWVKERRPSVELTQAVYQQLQEYEQNIFGPVDGSTPLVAGLPLGAAPSFSFGFAKNNDPAPNPAFVSAGATSIFSRSPLDIPPQEFTFGAGQNLSNDIQMDSS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00314 256 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Pte8g00314 256 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Pte8g00314 256 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Pte8g00314 256 Gene3D Protein tyrosine phosphatase superfamily 40 183 IPR029021 -
Pte8g00314 256 CDD DSP_plant_IBR5-like 47 176 - -
Pte8g00314 256 FunFam Protein-tyrosine-phosphatase IBR5 36 186 - -
Pte8g00314 256 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Pte8g00314 256 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
Pte8g00314 256 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 250 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Pte8g00314 256 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00314 Pte-Chr8 7306772 7311643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00314 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 72.781 2.07e-95 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00314 K04459 - zju:107417407 421.779