Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00294 CCGGAGGAAGAGGAGCTGCCTAAGGCTATCGTGCGCCGTGTAGTAAAGGATGCACTGTCGCGGTGCTCAGACGTTGGGGACATGTCTATTCACAGCAATGCCCTCCCCGCTTTTGCTGAAAGCGCCCGAATATTAATCAAAAGTGTGATTCATTATGCTTGTAGGGCCAACGATATATGTAAGGAGTCGAAGAGACAGACGATAAACGCTGATGATGTGTTCAACGCACTTGAAGATATTGAGTTCACTGAATTTGTCCGCCCTCTGAAAGCTTCTCTTGAA 282 0.4787 PEEEELPKAIVRRVVKDALSRCSDVGDMSIHSNALPAFAESARILIKSVIHYACRANDICKESKRQTINADDVFNALEDIEFTEFVRPLKASLE 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00294 94 Gene3D Histone, subunit A 1 94 IPR009072 GO:0046982
Pte8g00294 94 Pfam Core histone H2A/H2B/H3/H4 3 76 IPR007125 GO:0003677
Pte8g00294 94 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 3 94 - -
Pte8g00294 94 SUPERFAMILY Histone-fold 3 93 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00294 Pte-Chr8 6666440 6669434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00294 1 94 CCAAT-HAP3 Transcription Factor Family AT5G47640 33.333 7.93e-08 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pte8g00294 Histone 5.1e-06 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00294 K02326 - qsa:O6P43_000470 127.872