Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00293 ATGGCTTCCAAGCGTTGTGACTCGTGCAAATCTGCCACAGCCACTCTCTTCTGTAGAGCCCACATTACTTTCCTTTGTGTTGGTTGCGACTCCAAAATTCATGCTGCCAATAAACTTGCTTCTCATCATGCCTGTGTCTGGGTTTGCGAGGTCTGCGGGCAAGCTCCTACTCATGTCACTTGCACTGATGTTGCGGCTCTCTGCGTTACATGCGGCAAGCCATATGCGGAAGTGGACCAATTTAACGCAGAGAGCCGCAGCATCAGCTTTGCAAGTGACATGAGTAGGAGCTTGCTGTGTTAG 303 0.505 MASKRCDSCKSATATLFCRAHITFLCVGCDSKIHAANKLASHHACVWVCEVCGQAPTHVTCTDVAALCVTCGKPYAEVDQFNAESRSISFASDMSRSLLC* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00293 100 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 73 IPR045281 GO:0009909
Pte8g00293 100 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Pte8g00293 100 SMART bboxneu5 1 48 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00293 Pte-Chr8 6649156 6649458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00293 1 73 C2C2-CO-like Transcription Factor Family AT5G24930 72.973 5.64e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00293 - - qsu:111986927 126.716