Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00290 ATGGCATCAAAGGAAACTGAGCTCATATCCATAACCACCATAAAGCCTTCCTCACCCACTGCACCTCATCTTCGAACTTTCAAACTCTCATATCTGGATCAGCTCTTCCCTAATGTCTATTTTTCTACGATATTTTTCTATCCCGGTGACAATACTGTCTCAGTCCTTGCTGCTAGCGATCCTCATCATCTTCATGATCATGATCACACTGATTTTTTCTTTTCAAAGTCTAAACTTCTCCAAAAAGCTCTTTCTGAAACTTTAACTCTCTTCTATCCTTTGGCTGGGAGATTCCAAGATGATAGTACAATCATTTGCAACGATGCAGGTGTAGTCTTCACTGAGTCCAAAACCAATCATCTTCTTTCTGACATTTTGGCATCTCATGACTTCGACCTCATGTCTAGTGAGTTTGTTTCAGCTAACTATTCTGAAGTTTTGCAAGTGTCTAATGGCTCTTTGTTACTCGTCAATTTTATTCTGTTTCGTTGTGGTGGCACTGCAGTGAGTCTTACATCATCACACAAAATATTTGACTTATCTTCATGCATGACATTCTACAAAAGTTTAAGCGCAGCTTGTCGTGGATCTGAACAAATTGTCCCAGATTTTCACGCTGGACCAGCCCGCTTCCCGCCGAGGGAGATGCCAAATATTGTTGAAAAGCGCTCTGGAAATACACCGAAGGTCAGGACGAGACGTTTCGTGTTCACAGCATCCAAAATCCAAGAGCTCAAGACGGTTGCATCAGACAGCCTTAAGAAAGAGGGCTATGAATTTGATTATCTTTCTCGCGTCAATGTATTGACGGCATTCCTTTGGAAATGCCTCGTTACTTCTTTCATATCCCATAGAGGCTTCTTCAGACCAACAGTTATGACACAATCAGGTAATTTGCGGAACCGAGTTCGACCAGCATTACCCATGCATTCTATTGGGAATCTTTCATTCACGTTTACCAAAAATGTTATTGAAAAGGAAAGTGATGTTGAGTTGAGTGAGTTGGTCAAGAAGTTGTTAGAGTTGAAAGTTTCAATGGATGAAAAGGCCAAAAGGCTCAACTCTGATGAATTGGTTCGGGAACTAAGAGAAGAATCTGCAGAGATTTTCAGTAAGAAAGATCGTATGAACATTTACACTGGCGGAAGTTGGTGTAGAGTTGAATTTTACCAAGTTGATTTTGGAATGGGTAAGCCAGTTTGGGTGACAGGTGTTGCTCCTGGACACTCGGAAAATAGTGTTATGCTGTTGGACACAAAAGAGGAAGGTGAAGTTGAAGCTTTAGTGTGTTTAGAGGAAGAAGATATGAAAGCTTTTGAATGCAACAAGGAACTTTTACAGTTCGCAGTTGCCAGCTAA 1359 0.4099 MASKETELISITTIKPSSPTAPHLRTFKLSYLDQLFPNVYFSTIFFYPGDNTVSVLAASDPHHLHDHDHTDFFFSKSKLLQKALSETLTLFYPLAGRFQDDSTIICNDAGVVFTESKTNHLLSDILASHDFDLMSSEFVSANYSEVLQVSNGSLLLVNFILFRCGGTAVSLTSSHKIFDLSSCMTFYKSLSAACRGSEQIVPDFHAGPARFPPREMPNIVEKRSGNTPKVRTRRFVFTASKIQELKTVASDSLKKEGYEFDYLSRVNVLTAFLWKCLVTSFISHRGFFRPTVMTQSGNLRNRVRPALPMHSIGNLSFTFTKNVIEKESDVELSELVKKLLELKVSMDEKAKRLNSDELVRELREESAEIFSKKDRMNIYTGGSWCRVEFYQVDFGMGKPVWVTGVAPGHSENSVMLLDTKEEGEVEALVCLEEEDMKAFECNKELLQFAVAS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00290 452 Pfam Transferase family 7 445 - -
Pte8g00290 452 Gene3D - 228 449 IPR023213 -
Pte8g00290 452 PANTHER F21J9.9 7 449 - -
Pte8g00290 452 Gene3D - 4 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00290 Pte-Chr8 6642606 6645916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00290 74 440 Monolignol Biosynthesis Gene Families AT5G48930 24.359 3.18e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00290 - - qsa:O6P43_014532 339.347