Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00288 ATGGAGCTTTCCATAGTCTCCGAGGAATACATCATCCCTTCTTCCCCAACTCCTCACTGCCTAAGGACGCATTTAATGTCCTCCTTAGACCAGGTTTTTCCCCCCGGCTATGTGCGTATCGTACTTCTCTACCCAGCAGATGTTTATATTAGCACTTGTGATATCAATGTTGATGATATTTTCAAGAAAAGATTAGGGTTATTGAAGCAATCACTGTCAAAAACATTGTCTAGATTCTATCCACTGGCCGGAAGACTTAAAGACGAGATCTCCATTGACTGCAGTGACGAGGGAGTCTATTTTGTTGAGGCCAATGTCAAGTCGACCCTATCTAAGGTTCTCCAACAACCCCAGTTGTTTCACAAGTTGGTACCTGGTGGAGTAGAAACCGCAAGTTTGCCAACAAATAACATTGCTATGGTACAAGTAACGCGCTTTGCTTGTGGTGGCATGGCCATTTATGCTTCGATTTCTCATAAAATAGTTGATGCTTCTGCACTTAGCTTTTTCCTTAGAAGTTGGGCTGCCACGGCCAGTGATGATAGCGATCCTTATCAAATAGCTGTTCCAGATTTTGATGGGTCGACCCGTTTTCCAAGAACTGATCCTGCCCCAGATCCTACAGCACTGCTACCACCTTTCCTCTTCAAAACAGGTAGGTCTGTTACTAAGAGATTTAGGTTTGATGCTGAAGCAATCGCTGCACTTAAAGCAAAATCATGTAGCTCCAGTTGCAAGAAGAAGCCTTCTCGAGTTGAAGCCGTATCAGCGCTCTTATGTAAATCCATTTCAGCTGCAATGAAAGCCAGATCTGGCACAGCGAGTCCAATATTTAGTCATCATTCAGTGAATGTACGTCGTAGAGCTATGCCTCCATTGCCAGAGTCATGCATGGGGAATTATGTGTGTGTGGCACCTGCAACGTTGGGCATTGTAGATGAAAATACCGAGCTTTCAGATCTGGTGATTAAACTGAGGGAAGCAGTAACCATGACCTATCATCCAGATTTTGTCAAGTGTCTGGAAAGTGAACCTACGAAATTGTTTGATATCGTCAAAGAGATGGGGGAGGTTGCAGCTGCTACTGTTCATGGTTCAAACATGGAAACTGAATTTATTGCATTTAACAGTTGGTGTAACTTGGGATTGTATGATGTTGACTTTGGGTGGGGAAAGCCCCTGTGGGTTATACACATGCAATGTTTAGTTGATTTTGGCAACACTTACATGAATATTGTGTTTTTCATGGATACAAGATGCAAAGACGAAGTGGAGGCCTGGATAACTATAGATCAAGAAGTCATGGCGTTGCTGGAACAAGACAAGGAATTCATTGCATACGCTACCTTGGAACCATATCCATCTGAGTCTAATTAA 1377 0.4314 MELSIVSEEYIIPSSPTPHCLRTHLMSSLDQVFPPGYVRIVLLYPADVYISTCDINVDDIFKKRLGLLKQSLSKTLSRFYPLAGRLKDEISIDCSDEGVYFVEANVKSTLSKVLQQPQLFHKLVPGGVETASLPTNNIAMVQVTRFACGGMAIYASISHKIVDASALSFFLRSWAATASDDSDPYQIAVPDFDGSTRFPRTDPAPDPTALLPPFLFKTGRSVTKRFRFDAEAIAALKAKSCSSSCKKKPSRVEAVSALLCKSISAAMKARSGTASPIFSHHSVNVRRRAMPPLPESCMGNYVCVAPATLGIVDENTELSDLVIKLREAVTMTYHPDFVKCLESEPTKLFDIVKEMGEVAAATVHGSNMETEFIAFNSWCNLGLYDVDFGWGKPLWVIHMQCLVDFGNTYMNIVFFMDTRCKDEVEAWITIDQEVMALLEQDKEFIAYATLEPYPSESN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00288 458 Gene3D - 220 447 IPR023213 -
Pte8g00288 458 PANTHER F21J9.9 4 448 - -
Pte8g00288 458 Pfam Transferase family 2 444 - -
Pte8g00288 458 Gene3D - 1 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00288 Pte-Chr8 6600618 6602220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00288 67 440 Monolignol Biosynthesis Gene Families AT5G48930 24.936 3.40e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00288 - - pvy:116112663 369.392