Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00272 ATGGGAGATGGCTACCTTTGTCCAGCTTTCATTAAAGCTGTAAAGACAATGAAGAAGGAGGAGAAAGTTTTGTTAATAGTGCAGTCCAAATATGGATTTGGGAAATTGGCATATCAACTACTAAAGAAGAATATGACTGACATAACTAAGGATAAGAAAGTTCTCAAGAAAACTATAAAAGAGGGTGAAGGATATGAACGTCTAAATGATGGGGCAGTGGTACAAATCAAATTTGTTGGCAAGCTGGAAGATGGTACTGTATTTACTAAGAAAGGATATGATGAGCAGCCACTTGAGTTCAAAATTGATGAAGAGCAAGTTATTGAAGTTGAAGATGCCATTAAGATAGAACTGAACTAA 360 0.3583 MGDGYLCPAFIKAVKTMKKEEKVLLIVQSKYGFGKLAYQLLKKNMTDITKDKKVLKKTIKEGEGYERLNDGAVVQIKFVGKLEDGTVFTKKGYDEQPLEFKIDEEQVIEVEDAIKIELN* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00272 119 Gene3D - 1 45 IPR046357 GO:0003755
Pte8g00272 119 SUPERFAMILY FKBP-like 1 42 - -
Pte8g00272 119 Gene3D - 46 115 IPR046357 GO:0003755
Pte8g00272 119 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 119 IPR001179 GO:0003755
Pte8g00272 119 SUPERFAMILY FKBP-like 40 109 - -
Pte8g00272 119 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 43 IPR001179 GO:0003755
Pte8g00272 119 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 66 110 IPR001179 GO:0003755
Pte8g00272 119 PANTHER PEPTIDYLPROLYL ISOMERASE 44 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00272 Pte-Chr8 5712479 5713098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00272 1 90 Calmodulin-binding Proteins AT3G25230 32.381 1.27e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00272 K09571 - cave:132178855 142.895