Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00243 ATGCAGATTATCTGTTTGATTCTATTGTTTTCCCTTGTAAATGCACTGGCACAATCGGATGTTGAAGCACTTCTGGAGTTCAAGAAAGGCATTCAAAAGGATCCTTCCGGACTAGTTCTCTCGTCTTGGGATTCCAAGTCTTTAGCTTCCGATGGATGTCCACTCAATTGGCAAGGGATAGTGTGCATTGAAGGCAATGTCATATCCATAAATTTAAATGACATTGGTTTGGTTGGCGATTTTAATATTCATGCTGTTAATGGTCTTCAGATGCTTCGTAACTTAACAATTTCGAACAACCAGTTCACAGGAAATATCTTGAGTATTGGTTCGATGGAGTCCATTCAATATCTGGACCTTTCACAAAACAAGTTCCATGGATTGTTACCCTCTGACTTGGTACAATTACATAATTTAGTATCTTTGAACCTTTCTTTCAACCAATTTGAAGGTAGTCTCCCTCATGCCTTTGGAAAGCTCGAGCAATTGAAGTATCTAGATTTGCAGGCCAATAATTTTTCTGGAGATATTATGCACCTTGTGTCTCAAATGGGAAGTTCGGTATATGTTGATCTGAGCAGCAATATGTTTTCTGGTTCATTAGACCTGGGACGAGGCAATTCCTTGTTCGTTTCGTCTATACAATACTTCAATATCAGTCACAATCTCTTGGTTGGAGAGCTATTTGCCCATGATGGTTTGCCATACTTTGACAGTTTAGAGGTCTTTGATGCTAGTAAAAATCAGCTAGTGGGTGTGATCCCTCCCTTCAATTTTATCGTGTCACTAAGGATGCTTCGCCTTGGAAGCAACCTTCTCTCGGGGACTTTGCCGTTATCTTTATTGCAAGATAGCTCACTGATGTTATCAGAATTGGATGTCAGCCATAACATGCTGGAAGGCTCTGTTGGAAGTATCACCTCTCCAACTTTGAAGAAGCTCAATCTATCGTCAAACAAATTTTCAGGCCTTTTACCTGTAAAGGTTGGACACTGCGCGGTAATAGATTTAAGCAACAATTTGTTCTCAGGTGGTTTGTCAAGGATACAGTATTGGGGTAATTATGTGGAGATCATTCGGCTTAGTTCAAACTCACTGAAGGGAGTGTTTCCTAACCAAACATCACAATTTTTAAGGTTAACCGAGTTGAAGATGTCTAACAATTCATTGGAAGGGCCTATACCATTGGTCTTAGGTACATATCCAGAATTGGAAGTGATTGACCTTAGCCTCAATCAGCTTTCAGGACACCTTCTTCCCAGTTTTTTCAATTCAACGATATTGACTGATGTGAATCTGTCCAATAACAGACTTTCTGGATCTTTACCGATCCAAGATATCCCGAATAAACTTGGTGTAACCCCTACTAATCGTCCCCTTGTGTCTCTTGATCTTTCACATAATAACTTGACTGGGAATCTGCCTCCAGAAATTAGCAAGTTTCTTAACTTGGCATATCTCAATTTATCCAATAACAAATTTGAAGGAAGCATCCCAGAAAAACTTCCAGATAGTATTAGAGAATTGAATCTGTCATTCAACAATTTCTCTGGTACTGTACCTGAAACATTAATGCATTTTCCCGAATCAGCATTTCATCCTGGAAATCCGTTGCTTGCTTTACCACATTTGCCATCACCACCACCAACAGAAGTCCAAGACCTAGATTTCATGCAACATAAAGTCCACTTTAAATTTGGTATCAGAATTGCCCTCATTGCTTGTCTGGTTGGTGGGTTCTGTATGTTGGTTCTTTTAGGCATCATTATTTATTACAGGGACCATTTGAAAAAATGTGGATGCTGTTCGAAACAGAATGCACAAAAACTTGTTACTCAAGGTGCTACTTCTGCATGTCATGAACTGGCTCATAAAAGAAATGTTGAATCATTATCATCATTCAGTTTCAATACAAATCCAGTACATACTTTGGAGAAAGAGCCAGAAGAAGATGCTGGAGTTGTCCGATCAGCGGATCATGAAGTAAGTTATCCTGAATGTAGTGGACAAAAGGAAGGAATGTCCGTGCCACCTTCAAGTCCTTCAGATTCTCATCTATCTGAGAAGCCTAGTTTGCTCCAAGTGTGCTCTCCAGATAGATGGACTGGGGAGCTCCATCTATTTGATGGCTCCTTGATGTTCACAGAACCAGAACTTTCCCGTGCTGCAGCAGAAATGATTGGCAGAAGTTGCCATGGGATGTTGTACAAAGCTACACTTCCCTCTGACCTTAATTTGGCTGTCAAATGGTTGAGGGAGGAGATAGTAAAAGGGAAAAAGGATTTCTGTAGGGAAATAAAGAAACTTGGCTACATCAAGCACACAAATTTAGTCCCTCTACAGGGTTACTATTGGGGACCAAAGGACAGCGAGATACTACTCATATCTAATTATATCGATGCAATTTCATTGAACATCTACCTTCATGATGCAGATCAAAGGAATCTCCAGCGTTTGTCCGTTGATGAAAGGCTGAATGTGGCCACAGATATTGCTAAATGTCTTAACTACCTACATACTGAGAAGGCCATACCTCATGGCAACCTCAAATCCACCAACATTTTGTTATCGTTCCCCAACAGAAACACACTACTCAGTGATTACAGCCTGCATCGAGTATTGAACACTGTCGGTACTGCTGAGCAAGTGTTGAATGCAGGTGCTCTGGGCTATCTGCCGCCTGAATTTGCTAGCTCAAGCAAGCCAAGTCCATCTTTAAAGAGCGATGTTTATGCCTTTGGGGTTATCATGTTAGAGCTCCTCACAGGAAAGTGTGCCGGTGAGATAGTGTCTGGCATGGAAGAAGTGGTTGACTTGACGGACTGGGTGAGATTTCTGGCCCGTGAAAATCGTGCTACTGAGTGCTTTGATAGGCTTCTCCTGGACCAACAGCATAAAGGGGATCACACACTGAGAGTTCTTGATCATATGCTGCAGGTGGCTCTTAGATGTGTCCTTCCCGCATCAGAAAGACCCGAAATGCATACAGTTTTTGAAGATCTTTCAGCAATAAGATAG 3018 0.4122 MQIICLILLFSLVNALAQSDVEALLEFKKGIQKDPSGLVLSSWDSKSLASDGCPLNWQGIVCIEGNVISINLNDIGLVGDFNIHAVNGLQMLRNLTISNNQFTGNILSIGSMESIQYLDLSQNKFHGLLPSDLVQLHNLVSLNLSFNQFEGSLPHAFGKLEQLKYLDLQANNFSGDIMHLVSQMGSSVYVDLSSNMFSGSLDLGRGNSLFVSSIQYFNISHNLLVGELFAHDGLPYFDSLEVFDASKNQLVGVIPPFNFIVSLRMLRLGSNLLSGTLPLSLLQDSSLMLSELDVSHNMLEGSVGSITSPTLKKLNLSSNKFSGLLPVKVGHCAVIDLSNNLFSGGLSRIQYWGNYVEIIRLSSNSLKGVFPNQTSQFLRLTELKMSNNSLEGPIPLVLGTYPELEVIDLSLNQLSGHLLPSFFNSTILTDVNLSNNRLSGSLPIQDIPNKLGVTPTNRPLVSLDLSHNNLTGNLPPEISKFLNLAYLNLSNNKFEGSIPEKLPDSIRELNLSFNNFSGTVPETLMHFPESAFHPGNPLLALPHLPSPPPTEVQDLDFMQHKVHFKFGIRIALIACLVGGFCMLVLLGIIIYYRDHLKKCGCCSKQNAQKLVTQGATSACHELAHKRNVESLSSFSFNTNPVHTLEKEPEEDAGVVRSADHEVSYPECSGQKEGMSVPPSSPSDSHLSEKPSLLQVCSPDRWTGELHLFDGSLMFTEPELSRAAAEMIGRSCHGMLYKATLPSDLNLAVKWLREEIVKGKKDFCREIKKLGYIKHTNLVPLQGYYWGPKDSEILLISNYIDAISLNIYLHDADQRNLQRLSVDERLNVATDIAKCLNYLHTEKAIPHGNLKSTNILLSFPNRNTLLSDYSLHRVLNTVGTAEQVLNAGALGYLPPEFASSSKPSPSLKSDVYAFGVIMLELLTGKCAGEIVSGMEEVVDLTDWVRFLARENRATECFDRLLLDQQHKGDHTLRVLDHMLQVALRCVLPASERPEMHTVFEDLSAIR* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00243 1005 MobiDBLite consensus disorder prediction 673 689 - -
Pte8g00243 1005 SUPERFAMILY L domain-like 18 287 - -
Pte8g00243 1005 SUPERFAMILY L domain-like 459 529 - -
Pte8g00243 1005 Gene3D Transferase(Phosphotransferase) domain 1 802 1005 - -
Pte8g00243 1005 SMART LRR_typ_2 260 284 IPR003591 -
Pte8g00243 1005 SMART LRR_typ_2 481 505 IPR003591 -
Pte8g00243 1005 SMART LRR_typ_2 136 159 IPR003591 -
Pte8g00243 1005 SMART LRR_typ_2 160 187 IPR003591 -
Pte8g00243 1005 SMART LRR_typ_2 112 135 IPR003591 -
Pte8g00243 1005 Gene3D Ribonuclease Inhibitor 208 550 IPR032675 -
Pte8g00243 1005 MobiDBLite consensus disorder prediction 665 689 - -
Pte8g00243 1005 FunFam Leucine-rich repeat receptor-like protein kinase 706 798 - -
Pte8g00243 1005 Gene3D Ribonuclease Inhibitor 137 207 IPR032675 -
Pte8g00243 1005 Gene3D Ribonuclease Inhibitor 19 136 IPR032675 -
Pte8g00243 1005 Pfam Leucine rich repeat N-terminal domain 18 62 IPR013210 -
Pte8g00243 1005 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515
Pte8g00243 1005 SUPERFAMILY L domain-like 212 444 - -
Pte8g00243 1005 FunFam Nuclear pore complex protein NUP107 17 179 - -
Pte8g00243 1005 SUPERFAMILY Protein kinase-like (PK-like) 725 1001 IPR011009 -
Pte8g00243 1005 Gene3D Phosphorylase Kinase; domain 1 727 800 - -
Pte8g00243 1005 ProSiteProfiles Protein kinase domain profile. 721 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00243 1005 PANTHER OS07G0626500 PROTEIN 6 93 - -
Pte8g00243 1005 Pfam Protein tyrosine and serine/threonine kinase 725 926 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00243 Pte-Chr8 4599869 4604458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00243 239 532 Receptor kinase-like Gene Family AT3G51740 33.882 5.81e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte8g00243 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00243 - - qsa:O6P43_014611 1216.45