LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte8g00226	ATGGATCAAAGCTCCATATCTCATCGGACCGTCAAAAGCCGTCTTAAACCCGACATATACTCCACCGTGGTCGTCCACGACGACGACGACTACGGCGAAGACGGATACACTAACACAGACAGACAGCGACGGAGAAGCAAAGCCGCTTCAATCGAAGATGATCCATATGCAGCAATGTACAAAAACGACGGACGTGATGAACAAGAAGATGATTCCTCTCTCCCTCCACTCCTTAAACGACTCCCTAAGGACTTCGGTGGTGGAGTTTCAATTGACTATGACGACGAGTTCGCAGACGACGACGACGAAGGCACCGCCGACTTTGGGACAATGATAGTGAAGACTGATAGATCTCGGCAACCTTACCGGCATTCTGTCTCATCATCTTCACCTATGGCTTCGATCAGGAAACCATGGAGTTTGCCATTAGTTCAGGAGACTCCGAGGAGGACAAGAAGAAGAAGTCATAGTGGTGATGATGAGGAAGGAGATGATAACGAGGATGGAGGGTTTTCTACTTTTGTTGTGCGGTCGACTTTGAAATCAAGTGACAAAGATTCTTCGATTAGCGGGACGTTTGTGCGTAGAACCGCCGGCGGCGGCGGCGAAATTGAGTCTTCAATGGATATAGCGGTGGCGAGCATGCAAGCCGCAGGTGAGTTTGGGTTTGGGAAACAGAGGAAGGGAAGTGGGTCTTCGCAAAATGGCGAAGGTAGGCATCAGACGACTACTTCAAGCACTACAATGGCGACTAAGATATCTTCAAGTTCAATACCAGATAGTGTTACTAGAGAAGACCCTACAACAAAGTATGAACTGCTCAATGAACTTGGGAAAGGTTCTTATGGAGCTGTATACAAAGCTAGGGATATTAAAACTTCTGAACTTGTCGCCATCAAAGTTATTTCATTAAGCGAAGGGGAGGAGGGATATGAGGAGATTCGTGGAGAAATTGAGATGTTGCAGCAGTGTAGTCATCCAAATGTTGTTCGCTATCTTGGAAGTTATCAAGGAGAAGAGTATCTATGGATAGTGATGGAGTACTGTGGGGGTGGAAGTGTTGCTGACTTGATGAATGTAACTGAGGAGCCATTGGAAGAGTATCAAATAGCATTCATCTGTAGAGAAGCATTGAAGGGCCTCGCTTATCTGCATTCAATTTTCAAAGTCCATAGAGACATTAAAGGTGGTAACATCTTGTTAACTGATCAGGGAGATGTGAAGCTCGGTGATTTTGGCGTTGCAGCACAGCTTACAAGGACCATGTCCAAACGCAATACGTTTATTGGGACCCCACATTGGATGGCTCCTGAAGTTATTCAGGAAAGTCGGTATGATGGCAAGGTAGATGTGTGGGCCCTTGGTGTTTCAGCTATTGAAATGGCAGAGGGACTTCCTCCAAGATCTGCTGTTCATCCAATGAGAGTTTTGTTCATGATATCTATTGAACCAGCTCCAATGCTCGAGGACAAAGAAAAATGGTCGCTTGTGTTTCATGATTTTGTTGCCAAATGTCTTACAAAAGACCCTCGCCTGCGTCCTACTGCTGCTGAGATGTTAAAGCATAAATTTATTGAGAAATGCAAATCTGGCGCCTCTGCAATGGTGCCAAAGATTGAAAAGGCTAGGCAGGTTAGGGCTTCAATGGCTATGCAAGCACAAAATCTAACTCCTGCAGTTGAAGACACATCAACTGTAGCTCCAAACCTAAATGATGAATATGGAGATACTGTCCCGTCAAGACCTCAAGGGGTTCAAGGAGCAAATAAGTTATCAACAAAAAATACTATAAGGAAGCAGCAGGTTGTAGACATTGATAAAGAAGGTCAAGGCACTTTTGGCACTGTAATTGTGCATGATGAAGAGGAAGTAAAGAAGATGGCTACTGGCTCAGTTACTGATCCGTTGCCTGCTGCTAATGATGGTACAAGTATTGGCACTCGTAGTGCAGATGGCATCTCACTGGAAACTGGGGCGCTGAACATGAGAAGAGATCTTGAAGATCCTCTTACTCGAGCGTTGCAAGCAGTATCATTCAAGACGTCAAGCACTTTAGAAGCACAAGCTAGAGATTGTACCCTCGTAAATAAGAGTATGTTGAACAATGAAACGGTCAACCAGAAAGCATTTGCTTTGCAAGATAAGCTCTGGTCCATTTATGCTGCTGGTAATACTGTACCCATTCCATTTCTGAGGGCAACTGATATCTCTCCTATTGCTCTCCTATCAGACAATGTCATTGGAGGGATGCAACAAGATAGCAGTGGAGCTGTAGCGGTTGAAGCTCTGCAAGAGCTTTTCGCTGGTGAAGGACAACCTAAGAAGGGTCGAAGAGGACAGACTGAGATGCCGCTTCTTTCTGGTGTTTACCAAAGACTAACATCAAGTTCTACTCTCTTGAACTTGGCGCAAGCTTTGGCATACCACAAAATGTGTTATGAGGACATGCCACTCCAGGAGATGCAAGTGACTCAAGAACAGCAGACCATCCAAAATCTCTGTGATACATTGCGAACTATTCTACGATTGTAG	2532	0.451	MDQSSISHRTVKSRLKPDIYSTVVVHDDDDYGEDGYTNTDRQRRRSKAASIEDDPYAAMYKNDGRDEQEDDSSLPPLLKRLPKDFGGGVSIDYDDEFADDDDEGTADFGTMIVKTDRSRQPYRHSVSSSSPMASIRKPWSLPLVQETPRRTRRRSHSGDDEEGDDNEDGGFSTFVVRSTLKSSDKDSSISGTFVRRTAGGGGEIESSMDIAVASMQAAGEFGFGKQRKGSGSSQNGEGRHQTTTSSTTMATKISSSSIPDSVTREDPTTKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAFICREALKGLAYLHSIFKVHRDIKGGNILLTDQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKDPRLRPTAAEMLKHKFIEKCKSGASAMVPKIEKARQVRASMAMQAQNLTPAVEDTSTVAPNLNDEYGDTVPSRPQGVQGANKLSTKNTIRKQQVVDIDKEGQGTFGTVIVHDEEEVKKMATGSVTDPLPAANDGTSIGTRSADGISLETGALNMRRDLEDPLTRALQAVSFKTSSTLEAQARDCTLVNKSMLNNETVNQKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVIGGMQQDSSGAVAVEALQELFAGEGQPKKGRRGQTEMPLLSGVYQRLTSSSTLLNLAQALAYHKMCYEDMPLQEMQVTQEQQTIQNLCDTLRTILRL*	844

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte8g00226	843	Pfam	Protein kinase domain	271	525	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	222	266	-	-
	Pte8g00226	843	CDD	STKc_MAP4K3_like	270	525	-	-
	Pte8g00226	843	FunFam	Aurora kinase A	263	352	-	-
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	574	593	-	-
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	26	51	-	-
	Pte8g00226	843	SUPERFAMILY	Protein kinase-like (PK-like)	268	526	IPR011009	-
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	636	650	-	-
	Pte8g00226	843	FunFam	serine/threonine-protein kinase dst1 isoform X1	268	559	-	-
	Pte8g00226	843	PANTHER	SERINE/THREONINE-PROTEIN KINASE TAO	255	572	-	-
	Pte8g00226	843	ProSiteProfiles	Protein kinase domain profile.	271	525	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g00226	843	ProSitePatterns	Protein kinases ATP-binding region signature.	277	300	IPR017441	GO:0005524
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	172	194	-	-
	Pte8g00226	843	SMART	serkin_6	271	525	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	26	203	-	-
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	227	264	-	-
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	58	77	-	-
	Pte8g00226	843	MobiDBLite	consensus disorder prediction	631	650	-	-
	Pte8g00226	843	Gene3D	Transferase(Phosphotransferase) domain 1	267	563	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte8g00226	Pte-Chr8	4173852	4192898	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte8g00226	1	844	MAP Kinase Kinase Kinase Kinase	AT1G69220	59.132	0.0	880

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Pl	Pte8g00226		Pkinase	2.7e-69	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte8g00226	-		-	qsa:O6P43_032896	1082.78