Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00197 ATGGCGAAGCGTTTGATTCCCACTCTGAATCGCATTTTGGTGGAGAAAATCATTCCTCCATCTAAGACCAACACGGGTATCTTACTACCTGAGAAAACCACCAAGCTCAATTCTGGAAAAGTTATTGCTGTTGGCCCAGGAGCTCGTGATAGAGAAGGGAAACATATTCCTGTTAGTGTTAAAGAAGGAGACGTAGTTCTTTTGCCTGAATATGGAGGAACAGAAGTGAAACTCGGAGAGAAAGAGTAA 249 0.4297 MAKRLIPTLNRILVEKIIPPSKTNTGILLPEKTTKLNSGKVIAVGPGARDREGKHIPVSVKEGDVVLLPEYGGTEVKLGEKE* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00197 82 Gene3D GroES chaperonin 1 82 IPR037124 GO:0006457
Pte8g00197 82 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 81 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte8g00197 82 Pfam Chaperonin 10 Kd subunit 5 81 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte8g00197 82 CDD cpn10 4 82 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte8g00197 82 SUPERFAMILY GroES-like 4 82 IPR011032 -
Pte8g00197 82 SMART Cpn10_2 4 82 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte8g00197 82 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte8g00197 82 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte8g00197 82 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte8g00197 82 FunFam 10 kDa chaperonin, mitochondrial 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00197 Pte-Chr8 3660576 3661470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00197 3 77 Calmodulin-binding Proteins AT5G20720 42.105 1.42e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00197 K04078 - egr:104433894 151.754