Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00183 ATGATTTTCATTCCTGCTCAACAATCTGCAAATCAACTTCAAACTATGGCAACATGTTTTCAGCAATGTTTCACTGAAGATGACACTGTGATACCTTTCTCAACTTCTAGTTCCCCAGAAGACTCCATGAGCTATTCTTCTTCATCTTATCATTCACCTCCACCACAACTTCATCAATTCTCAACTGCACACAAATTACATGTGAAAAATCTCAACTACACTATTTACCCCAATATATCTTCACCTGCATCTTGCTTGTTTCGCCTGTGGGAAAAGCCTAAGCCTATTAGCATACTGCAGTCAGTTTATTTTGCTGCAAGGAGTTCGGAAATTCTTGCCATTGTTGGTCCTAGCGGCACCGGGAAGTCCAGTCTTCTCAGAATAATATCTGGCAGAGTGAAAGATAAGGATTTCGGTTCTATCGATATTTCCATAAATGATCATAGGGTGACCGCTTCAGCGCAGTTGCGCAAGATATGTGGTTATGTCGCTCAGGAAGATAACTTGCTTCCTCTTTTAACAGTGAGAGAAACATTAATGTTTAGTGCAAACTTCAGGCTTAAAGGAATGAGTGTAAAGGAGAAAGTAGAAAGAGTAGAAAGCTTGATGCAGGAATTAGGGCTGCTGCATGTTGCCGATAGTTTTGTTGGAGATGAAGAGAATAGAGGGATATCTGGGGGAGAGAGGAAAAGGGTATCAATTGGTGTTGACATGATTCAGAACCCACCGTTTCTCTTGCTAGATGAACCAACTTCAGGCCTAGATAGCACTTCAGCATTGCAAGTGATAGAGCTACTGTCTTCAATGGCAAAAGCGAAGCAACAAACTGTCATTATGTCAATCCATCAGCCTAGTTACAGAATGCTCCAATACATTTCTAATTACTTGATCCTATCACATGGCTCTGTTGTACACAGTGGTAGTTTGGAATCACTTGAGGAGAAGATTGCTCAATTGGGATTCCGAATTCCAATACAATTGAATGTTTTGGAGTTTTCCATGGAAATTCTTGACACGCTGGAAACTTCATTTGCCAATAATCACACTACTAGAATGGTTGATGAAGAGCCAGTCTTCAATCCAATATGGCTGCAGGACGGAAATTCTGAACAGAGAAATCACTACAGCACAAAACAAATTGGTATCAGTAATGTTTTTTATTTTAATATGATGGAGATCATGTTTCTTTGCTCAAGGTTTTGGAAGATAATTTACAGAACAAAGCAGCTGTTCCTGGCAAGAACAATGCAAGCTCTAGTTGGTGGATTTGGGTTGGGGAGTGTGTACATAAAGGTGAGAAGAGATGAAGGAGGAGTAGCCGAAAGATTAGGCCTCTTCGCTTTCAGTCTCAGCTTTCTTCTATCTTCTACATTAGAAGCACTTCCAATCTACTTGCAAGAAAGGAGAGTTCTTATGAAAGAAGCCTCAAGAGGAGCCTATCGAATCTCATCCTACATGATAGCCAACACCATCGTCTTTCTACCTTTCTTGTTTGTTATATCCATACTGTTTGCCATTCCAGTTTACTGGATTGTAGGACTCAACCCATCAGTCTCAGCATTTGCCTTCTTCACATTCATGGTATGGCTGATTGTGATGATGGCAAGTTCTTTAGTACTATTTTTAAGTGCAGTGTCTCCTGATTTCATTTCAGGAAACTCACTCATCTGTACAGTCCTTGGAGCCTTCTTTCTTTTCTCTGGGTACTTCATCCCAAAAGAGAGCATCCCAAAATATTGGCTGTTCATGTACTATGTGTCTCTGTATAGGTACCCATTGGATTCGTTGATAATAAATGAATATTGGAGCATGAAGGATGAGTGCTTCTCTATGCAAGCAGATGACTCATCTAAGTGTCCGCTGACAGGAAATGATGTACTCAAGAGTAGAGGGCTTGACAAGGACAATAGGTGGTTTGATGTGGGGATCATGGTTATATTTTGTAATAGCGCAACCAACCCACTTGTGATATTGTCCATAGAGCAACCAACCCACATGTGA 2001 0.4063 MIFIPAQQSANQLQTMATCFQQCFTEDDTVIPFSTSSSPEDSMSYSSSSYHSPPPQLHQFSTAHKLHVKNLNYTIYPNISSPASCLFRLWEKPKPISILQSVYFAARSSEILAIVGPSGTGKSSLLRIISGRVKDKDFGSIDISINDHRVTASAQLRKICGYVAQEDNLLPLLTVRETLMFSANFRLKGMSVKEKVERVESLMQELGLLHVADSFVGDEENRGISGGERKRVSIGVDMIQNPPFLLLDEPTSGLDSTSALQVIELLSSMAKAKQQTVIMSIHQPSYRMLQYISNYLILSHGSVVHSGSLESLEEKIAQLGFRIPIQLNVLEFSMEILDTLETSFANNHTTRMVDEEPVFNPIWLQDGNSEQRNHYSTKQIGISNVFYFNMMEIMFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKVRRDEGGVAERLGLFAFSLSFLLSSTLEALPIYLQERRVLMKEASRGAYRISSYMIANTIVFLPFLFVISILFAIPVYWIVGLNPSVSAFAFFTFMVWLIVMMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDSLIINEYWSMKDECFSMQADDSSKCPLTGNDVLKSRGLDKDNRWFDVGIMVIFCNSATNPLVILSIEQPTHM* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00183 666 Pfam ABC transporter 99 252 IPR003439 GO:0005524
Pte8g00183 666 FunFam ABC transporter G family member 23 90 323 - -
Pte8g00183 666 Gene3D - 69 349 IPR027417 -
Pte8g00183 666 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524|GO:0016887
Pte8g00183 666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 648 - -
Pte8g00183 666 SMART AAA_5 108 331 IPR003593 GO:0016887
Pte8g00183 666 Pfam ABC-2 type transporter 282 348 IPR043926 GO:0140359
Pte8g00183 666 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 66 325 IPR003439 GO:0005524
Pte8g00183 666 Pfam ABC-2 type transporter 393 601 IPR013525 GO:0016020|GO:0140359
Pte8g00183 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00183 Pte-Chr8 3474795 3476999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00183 96 315 Calmodulin-binding Proteins AT2G36910 28.700 2.57e-13 71.6