Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00181 ATGGCGGACCATGGCCCTTCAATTTCTCTTTCTCAAGGTCGTGACTTCTCACACACCTCCGACGAAGAGTTCTCTGAACATAGCGTGCCATCTCTCTCTCCAGTCCGAGCTACCAACCCCACAACTACTCCTGCCGTCGCCTTTGGTGTTGCTGGTGTTGTCAGTTCCTCCCCGGTTTCCAAGCAGAAAACATCACCTCCTTCCTCGAGCTTCATCGCTGATCAGCAAATAGGTTCACCGACTGCAACAGCACTGGTAATGGCAGAGGTCTCGACTTCCAAGAAACCCAGAGGCAGACCCCCTGGTTCCAAGAACAAACCGAAGCCTCCCATTGTGATCACCAAGGAGAGTGAGTCAGCAATGAAACCCGTCATCATTGAGATCTCCGCTGGCTGTGATGTTGTTGAGTGTCTCGTCAACTTTGCTCGTAAGAGACACGTGGGAATCACTGTTCTTAGCGGTTCTGGGTCTATTTCAAACGTTACCCTTCGGCACCCAATTTCTCACGCGCCTGCTCTCTCCCTCCATGGACCCTTCAGCCTGTTATCCCTCTCAGGTTCTTATGTATCAACGATGTCAAGTAAGCATGCGACGTCGTCTTCTGCACCTCCCTCATCTTGTTCTTCATTTGGGATATGTCTAGCTGGTGCACAAGGCCAAGTCTTTGGAGGTATAGTTGGAGGGAAGGTTGTAGCGGCCAGTCTTGTTGTGGTTATGGTGTCAACATTTATGAACCCTTCATTTCATAAGCTGCCTGATGAGATTGGTGAAGCTGAGGACGCAAAACAAAGTATTGGCGGTAGTGATGTTAGTGAAGGAGGTTGCACCAACAGCAACAATAATGCAATGTCCATGACTGTTTACTCCACTGTTCCAAGTCCCAACCCACTGAATTGCCATGTCCCTGCTGATGCCATGCCATGGAGTTCTCCTGCTTCTCGCCCTCCTTACTAA 954 0.5 MADHGPSISLSQGRDFSHTSDEEFSEHSVPSLSPVRATNPTTTPAVAFGVAGVVSSSPVSKQKTSPPSSSFIADQQIGSPTATALVMAEVSTSKKPRGRPPGSKNKPKPPIVITKESESAMKPVIIEISAGCDVVECLVNFARKRHVGITVLSGSGSISNVTLRHPISHAPALSLHGPFSLLSLSGSYVSTMSSKHATSSSAPPSSCSSFGICLAGAQGQVFGGIVGGKVVAASLVVVMVSTFMNPSFHKLPDEIGEAEDAKQSIGGSDVSEGGCTNSNNNAMSMTVYSTVPSPNPLNCHVPADAMPWSSPASRPPY* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00181 317 MobiDBLite consensus disorder prediction 1 42 - -
Pte8g00181 317 ProSiteProfiles PPC domain profile profile. 118 264 IPR005175 -
Pte8g00181 317 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 254 - -
Pte8g00181 317 CDD DUF296 122 243 IPR005175 -
Pte8g00181 317 Pfam Plants and Prokaryotes Conserved (PCC) domain 122 244 IPR005175 -
Pte8g00181 317 Gene3D - 121 263 - -
Pte8g00181 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 79 275 IPR014476 GO:0003680
Pte8g00181 317 MobiDBLite consensus disorder prediction 56 76 - -
Pte8g00181 317 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00181 Pte-Chr8 3412056 3413404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00181 90 316 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.553 2.10e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00181 - - zju:107410711 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00181 8 3412056 3413404 Pte8g00181 8 3412056 3413404 RCT