Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00166 ATGAGGATTAAGAAAAGCAAAATTCCAATTGTTCAGCTCAACCAAGAAAATCGGAGCAAGAAAGTGCGGGAAAGTGAAGGGAAAACTTGGATGCTGAACACAGGTGATGATTCTGTTTCCGGAAAGAAAATTAAGTTCTTGTGCAGTTTTGGTGGGAAAATTCTGCCAAGACCGAGTGATGGCATGTTGAGGTATGTTGGAGGACATATCAAAATTATCAGTGTTAAGAGAGATGTAAGCTTTTATGAGCTAATGCAAAAGATGGCTAATACATATGGTCAGGCCATTGTCATTAAATATCAACTCCCAGGGGAGGATCTTGATGTATTAGTGTCAATTTTTTGTCCTGATGATCTTAATAATATGATGGAGGAGTATGAAAAGCTAGTCTAG 393 0.3817 MRIKKSKIPIVQLNQENRSKKVRESEGKTWMLNTGDDSVSGKKIKFLCSFGGKILPRPSDGMLRYVGGHIKIISVKRDVSFYELMQKMANTYGQAIVIKYQLPGEDLDVLVSIFCPDDLNNMMEEYEKLV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00166 130 PANTHER OS05G0427100 PROTEIN-RELATED 36 127 - -
Pte8g00166 130 CDD PB1_UP2 47 129 - -
Pte8g00166 130 Gene3D - 65 129 - -
Pte8g00166 130 SMART PB1_new 58 130 IPR000270 GO:0005515
Pte8g00166 130 Pfam PB1 domain 63 128 IPR000270 GO:0005515
Pte8g00166 130 SUPERFAMILY CAD & PB1 domains 59 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00166 Pte-Chr8 3176137 3177882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00166 42 130 MAP Kinase Kinase Kinase AT3G46920 64.045 1.30e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00166 - - egr:104436151 167.933