Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00165 ATGGAAGTAGAATCAAGTGAACCACATTCAGGAGAAAATAAGGCTTTTCAGGAGAAAAATAAGAAAAGACAACACAAATCAGCAGCCCAGCTCAATGCACTAGAGAACTTCTACAATGAGCATAAATATCCAACAGAAGAGATGAAATCTGATCTCTCTGTGGAGCTAGGTTTGTCAGAAAAGCAAATATCTGGTTGGTTTTGCCATAGAAGATTGAAAGACAAAAAGTTAACAGATGAAGTGCATGGGAGTGGAAGGCAAGACCATTCTAGTGGAGTCATTCAGGATCGTGAATTTGGGCAAGATTCATGTGTAAGCACTAAACATGCTGATTATAAGCATTTCGATCCTAGAGAAGTTGAAAGCCAGGGCGTTTATGACCGTGGTTTGCCTGATATGGGTCTGAGTTACGATCGTAAGAGTGGTCCCTGTACAGAAAATATTTGTGAAATGGATAGTACATGTTTTGAGAGTAGCTCATTTTTACGAGACAGATTACATTATGAAATGCCGGAACCGTATGATATGATACCTGCTAGTGCTAGATACTTGAAAAATGATGGAGATTTGCCACCAATAAATTCCATGGGTCAAACTAACATGGGATATAAACCCTCAGGATATTTGAAAGTGAAGGGTGAGATAGAAAATGAAGCTATAAGTACTGTGAAGATGCAATTGGGAAAGACTTATAGGGTGGACGGTCCGCTGCTTTCCATAGAATTTGATCAAGTTCCTCCTGGTGCTTTTGAGTTTGTGGTTGCGGATCCTGTCCATGAATCGTATAATCTTGAGAATCCTATTGTTCCGGGTCCCTCTAATGTTTCTTCAGCAAAAAGGGAAACCGATTTTAGCTCAAGATATGATTACAATGCTCAGTATAGTTCCCATGAACCACCTGCTGGAGGGGAGAACCGGGTACTTGAATCTGATTTCCAGGAAAAGAAGCCTCGCCAGCATATAAAGAGAAGGTCCCCTTTTCTCAATCATAGTGATCCTTTCCCTGGAAGGAACACTTCTGATACTAATGAAGATTCTATCAAATTTGAATCTGGTTTTAGTGGCAAAAGAGGTCGTCGAATAAGTTCTAAGCACAATATTGATGGATTGAGATCTGACTCGGCTTCTTACAGTAGTGGTCATCATTATGGAGAAAAGATTGGCATTGATCAGCAAGAGCCTCTATTGCATGGCTATGATGATGCTGGCACAAAGATGAGAAGTGAATTTACAAAACTCAGGCCTTCAAGTTTAATACCTAGTGATCATGCTTTAGCTGAAACGGAAAGGGGAAGATCTTTATGGATGGAGAAGGACAGTTTTAGTGTGGAAAGGAAATCTATGAAAGTATATGATGATTCAATTAAAGGCAGGAAACATCTAAGAAAGGAAAGGAAGGTAGTAAAACTCGGCAAAGTTGGTCTTCCTCCTCGAGATTGGATTAAACGAATACCCACCGCTGACTTGCCACCCCTGCAAAAACTGAGATCCGCAATGGAGATGCCTACCAGCTTTAGTGAAGATGAAACAGCAGAAACCAGTTCTTCTGTGGAATGA 1557 0.4053 MEVESSEPHSGENKAFQEKNKKRQHKSAAQLNALENFYNEHKYPTEEMKSDLSVELGLSEKQISGWFCHRRLKDKKLTDEVHGSGRQDHSSGVIQDREFGQDSCVSTKHADYKHFDPREVESQGVYDRGLPDMGLSYDRKSGPCTENICEMDSTCFESSSFLRDRLHYEMPEPYDMIPASARYLKNDGDLPPINSMGQTNMGYKPSGYLKVKGEIENEAISTVKMQLGKTYRVDGPLLSIEFDQVPPGAFEFVVADPVHESYNLENPIVPGPSNVSSAKRETDFSSRYDYNAQYSSHEPPAGGENRVLESDFQEKKPRQHIKRRSPFLNHSDPFPGRNTSDTNEDSIKFESGFSGKRGRRISSKHNIDGLRSDSASYSSGHHYGEKIGIDQQEPLLHGYDDAGTKMRSEFTKLRPSSLIPSDHALAETERGRSLWMEKDSFSVERKSMKVYDDSIKGRKHLRKERKVVKLGKVGLPPRDWIKRIPTADLPPLQKLRSAMEMPTSFSEDETAETSSSVE* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00165 518 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 518 - -
Pte8g00165 518 MobiDBLite consensus disorder prediction 332 349 - -
Pte8g00165 518 MobiDBLite consensus disorder prediction 78 95 - -
Pte8g00165 518 MobiDBLite consensus disorder prediction 492 518 - -
Pte8g00165 518 MobiDBLite consensus disorder prediction 78 99 - -
Pte8g00165 518 MobiDBLite consensus disorder prediction 499 518 - -
Pte8g00165 518 ProSiteProfiles 'Homeobox' domain profile. 17 77 IPR001356 GO:0003677
Pte8g00165 518 Pfam Homeodomain 21 76 IPR001356 GO:0003677
Pte8g00165 518 SMART HOX_1 19 81 IPR001356 GO:0003677
Pte8g00165 518 Gene3D - 10 92 - -
Pte8g00165 518 MobiDBLite consensus disorder prediction 350 367 - -
Pte8g00165 518 MobiDBLite consensus disorder prediction 1 33 - -
Pte8g00165 518 CDD homeodomain 21 76 IPR001356 GO:0003677
Pte8g00165 518 MobiDBLite consensus disorder prediction 312 401 - -
Pte8g00165 518 MobiDBLite consensus disorder prediction 1 25 - -
Pte8g00165 518 SUPERFAMILY Homeodomain-like 19 82 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00165 Pte-Chr8 3167621 3173227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00165 1 266 Homeobox Transcription Factor Family AT4G03250 45.926 4.32e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pte8g00165 Homeodomain 4.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00165 - - gmx:100803515 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00165 8 3167621 3173227 Pte8g00165 8 3167621 3173227 RCT