Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00162 ATGGCATCCAAGAGTGACGATGAGGAGACAAGTGATTTGTCTACTCCATCCTCGACACTAAGTGTGTACAAGGATCCTGATGATGGAAGGCAAAGGTTTTTGCTAGAATTGGAGTTTGTCCAGTGCCTTGCCAATCCCACCTATATTCATTACTTGGCACAGAATCGCTACTTTGAAGATGAAGCATTCATCGGATACTTGAAATACCTTCAGTATTGGCAACGGCCTGAATACATAAAGTTTATAATGTATCCTCATTGCCTATTTTTCCTTGAACAACTTCAGAATGCTAACTTCCGCAATGCAATGGCACATCCAGGCAACAAGGAATTGGCGCACAGGCAGCAATTCTTCTTTTGGAAAAATTATAGGAATAATCGGCTAAAGCACATCTTACCTAGAGCTGTTCCTGAACCTGCTGCTGCTCCTGCAGCCCCTGCTCCCACCCTTCCTCCAGCTCCCCCACCTGTGCCTTCGGTGCCACCTGCACCTACACCTGCAACAACCGTTCCTGTGACAGCACTGTCTGCTCCAACTGTCTCATCGATGCAGTACGGCATATCATCTGCCTCTCCTTTTGCAAAAAATGACATGAGAAATGTAGGAGTTGATCGGAGAAAGAGAAAGAAAGACATGTAA 639 0.4554 MASKSDDEETSDLSTPSSTLSVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLFFLEQLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRAVPEPAAAPAAPAPTLPPAPPPVPSVPPAPTPATTVPVTALSAPTVSSMQYGISSASPFAKNDMRNVGVDRRKRKKDM* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00162 212 MobiDBLite consensus disorder prediction 142 168 - -
Pte8g00162 212 FunFam Mediator of RNA polymerase II transcription subunit 31 19 120 - -
Pte8g00162 212 MobiDBLite consensus disorder prediction 186 212 - -
Pte8g00162 212 Pfam SOH1 31 123 IPR008831 GO:0003712|GO:0006355|GO:0016592
Pte8g00162 212 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 18 120 IPR038089 -
Pte8g00162 212 MobiDBLite consensus disorder prediction 142 170 - -
Pte8g00162 212 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 8 209 IPR008831 GO:0003712|GO:0006355|GO:0016592
Pte8g00162 212 MobiDBLite consensus disorder prediction 1 24 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Pte8g00162 Med31 9.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00162 K15153 - qsa:O6P43_009222 273.092