Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte8g00162 | ATGGCATCCAAGAGTGACGATGAGGAGACAAGTGATTTGTCTACTCCATCCTCGACACTAAGTGTGTACAAGGATCCTGATGATGGAAGGCAAAGGTTTTTGCTAGAATTGGAGTTTGTCCAGTGCCTTGCCAATCCCACCTATATTCATTACTTGGCACAGAATCGCTACTTTGAAGATGAAGCATTCATCGGATACTTGAAATACCTTCAGTATTGGCAACGGCCTGAATACATAAAGTTTATAATGTATCCTCATTGCCTATTTTTCCTTGAACAACTTCAGAATGCTAACTTCCGCAATGCAATGGCACATCCAGGCAACAAGGAATTGGCGCACAGGCAGCAATTCTTCTTTTGGAAAAATTATAGGAATAATCGGCTAAAGCACATCTTACCTAGAGCTGTTCCTGAACCTGCTGCTGCTCCTGCAGCCCCTGCTCCCACCCTTCCTCCAGCTCCCCCACCTGTGCCTTCGGTGCCACCTGCACCTACACCTGCAACAACCGTTCCTGTGACAGCACTGTCTGCTCCAACTGTCTCATCGATGCAGTACGGCATATCATCTGCCTCTCCTTTTGCAAAAAATGACATGAGAAATGTAGGAGTTGATCGGAGAAAGAGAAAGAAAGACATGTAA | 639 | 0.4554 | MASKSDDEETSDLSTPSSTLSVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLFFLEQLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRAVPEPAAAPAAPAPTLPPAPPPVPSVPPAPTPATTVPVTALSAPTVSSMQYGISSASPFAKNDMRNVGVDRRKRKKDM* | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte8g00162 | 212 | MobiDBLite | consensus disorder prediction | 142 | 168 | - | - | |
Pte8g00162 | 212 | FunFam | Mediator of RNA polymerase II transcription subunit 31 | 19 | 120 | - | - | |
Pte8g00162 | 212 | MobiDBLite | consensus disorder prediction | 186 | 212 | - | - | |
Pte8g00162 | 212 | Pfam | SOH1 | 31 | 123 | IPR008831 | GO:0003712|GO:0006355|GO:0016592 | |
Pte8g00162 | 212 | Gene3D | Mediator of RNA polymerase II, submodule Med31 (Soh1) | 18 | 120 | IPR038089 | - | |
Pte8g00162 | 212 | MobiDBLite | consensus disorder prediction | 142 | 170 | - | - | |
Pte8g00162 | 212 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 | 8 | 209 | IPR008831 | GO:0003712|GO:0006355|GO:0016592 | |
Pte8g00162 | 212 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SOH1 | Pte8g00162 | Med31 | 9.9e-35 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte8g00162 | K15153 | - | qsa:O6P43_009222 | 273.092 |