Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00152 ATGGAGCCCATATCATCAGCCATAACGCAAGATGATAGAAGATTCTGTCAACTAAAAAATGAGAATATTGAAGTGTGGGATGGAATAAGTAATGCTGGATTCTTAGGGTTCGAACAAGAACCTGCGTACCTGGCTTGCCATGAAAGTACTGTAGGAGATGAAAAGTTGCAAATGATCACGGAAGAGAGGAAGACAAGGAGACGGATGGACGAGAGGAACAATAGCTCCAAGATTTTGTCACGGAGAATCATTTCGCAGTACTTCTATATGCCCATAACGCAAGCGGCGAAGGAGCTTAATATTGGTCTCACCCTCCTCAAGAAACGGTGCAGAGAGTTAGGTATACGTCGGTGGCCACACAGAAAGCTTATGAGTCTTCAAACCCTCATAAGAAATGTGCAGGAGATGGGAAAGGGGGAGGGGAAGGAGAGCGAAGAAAAATTGAGAAATGCTATTGAAATATTGGAGAGGGAAAAGAAGCTTTTGGAAGAGACGCCAGATTTACAGCTGGAAGATCAAACCAAGAGGCTCAGACAAGCTTGTTTTAAAGCGAACTACAAGAAGAGGAGACTCATGACAATGACAGAATGGAAATGTCCATTTAGTACCGGTACTAGCAGTGCCGCAAGCAGGAGTTATGCGATAGAGGATGAAGACGACTATGGCCGCCAAGAGGAGATGAAGTTTCTGCTGTCTGACTGCAGCTCTTCTACAATGAATAAATCTCTTGTTTAG 735 0.4408 MEPISSAITQDDRRFCQLKNENIEVWDGISNAGFLGFEQEPAYLACHESTVGDEKLQMITEERKTRRRMDERNNSSKILSRRIISQYFYMPITQAAKELNIGLTLLKKRCRELGIRRWPHRKLMSLQTLIRNVQEMGKGEGKESEEKLRNAIEILEREKKLLEETPDLQLEDQTKRLRQACFKANYKKRRLMTMTEWKCPFSTGTSSAASRSYAIEDEDDYGRQEEMKFLLSDCSSSTMNKSLV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00152 244 ProSiteProfiles RWP-RK domain profile. 60 146 IPR003035 -
Pte8g00152 244 Coils Coil 145 165 - -
Pte8g00152 244 Pfam RWP-RK domain 80 126 IPR003035 -
Pte8g00152 244 PANTHER PROTEIN RKD4 78 193 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00152 Pte-Chr8 2994934 2996205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00152 76 195 AtRKD Transcription Factor Family AT1G18790 72.500 2.40e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pte8g00152 RWP-RK 1.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00152 - - qsa:O6P43_001960 231.876