Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00144 ATGTGCTTCCTCAAAGAAATTTCCTCTCTTCCTAATCTCAAGTTTCTTGTCTATGGCGCAACCAGCCATTTAATGTATCGTTTCTCTACTCTAGCTTCAGTTGAGCTTGCCTTAAATCAGAAACCTCTCCCTCCTGGTGACCTCATTTCTGCCATTAACTTTACTGAGCTCCGACGAAGCTATGTGCAAAAGCGAATTTCCAATCTCAGGTCACCTGATACGCCGCTCAATGTCCTCAAACTTCTTCAAAAGCATGGCTTCTCTGAATCTCAAATGCTAGCTACTATCAGGCATCCTCCCGTACTCTTCGCAAATGCTGAAAAGACCCTCAAGCCAAAACTTGACTTCTTCCAGCAATTAGGTATTGTGGGTTCTGACTTGGGAAAGTTTATTTCTCGTCATCCTAATCTTTTGTTCGTTAGCTTGGAGAAAACTTTGGTACCCAGTGTAGAGATTCTCAGAAATATTATTAACGTCAGTTCTGGCAAACAAAAATTTGTAGCTGTATTGCGGAAATGTGGCTATGTGTTGCCTAGAACTTCACGTTTGATAAGCAATATTGCCTTCTTTGAGGGTTGTGGGATTGTTGGGTCTCAACTTTTATTGTTACTCAGTAGGCAGCCTAGACTTTTCATTTCACCAGAGTCGCGGGTTAAAGATCTTTTTGCACGGGCTAGAGACCTGGGTTTCTCTACGCATTCGAGAATGTTTGTTCACGCTGTGGTGTCATTAGCTGGTCTTAGTGTTGTAACATTTAAGAGAAAGCTGAAAATTTTCATCAACTTTGGATTTACTAACCAAGAGATCGTGCAAACATTTGGTGGTGGTCCATATTTACTTACGCTCTCTGAGGATAGGTTGAAAATTGCACTTGAATTCTACTTGTCTACTTTGCAATTCGAGAAGTCGGACTTGGTTCGTTTCCCTCCGTACTTGATGTATAGTATTGAAAAACGTGTAATTCCTCGATACAAGGTTTTGAAGATGATAGAGTCAAAGAAGTTGGTGAACAGGCAGCCAAGTTTTGCTTCGGTGATACCAATGTCTGAGGATAAATTTTTGCAGAAATTCATTTTCGCTTTCCAAGAGGACATGGAAGAGTTGTTGGTTGTTTACAAGGGTGAGTATCAAGTCTATTTCTGA 1143 0.4086 MCFLKEISSLPNLKFLVYGATSHLMYRFSTLASVELALNQKPLPPGDLISAINFTELRRSYVQKRISNLRSPDTPLNVLKLLQKHGFSESQMLATIRHPPVLFANAEKTLKPKLDFFQQLGIVGSDLGKFISRHPNLLFVSLEKTLVPSVEILRNIINVSSGKQKFVAVLRKCGYVLPRTSRLISNIAFFEGCGIVGSQLLLLLSRQPRLFISPESRVKDLFARARDLGFSTHSRMFVHAVVSLAGLSVVTFKRKLKIFINFGFTNQEIVQTFGGGPYLLTLSEDRLKIALEFYLSTLQFEKSDLVRFPPYLMYSIEKRVIPRYKVLKMIESKKLVNRQPSFASVIPMSEDKFLQKFIFAFQEDMEELLVVYKGEYQVYF* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00144 380 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 SMART mt_12 235 265 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 SMART mt_12 128 160 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 SMART mt_12 267 301 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 SMART mt_12 167 196 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 Pfam mTERF 79 162 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 Pfam mTERF 184 354 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 PANTHER CGI-12 PROTEIN-RELATED 60 359 IPR003690 GO:0003690|GO:0006355
Pte8g00144 380 Gene3D Transcription termination factor 3, mitochondrial 162 368 IPR038538 -
Pte8g00144 380 FunFam Mitochondrial transcription termination factor-like 149 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00144 Pte-Chr8 2500454 2502202 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte8g00144 mTERF 6.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00144 K15031 - jre:108985778 310.842