Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00143 ATGTGTTTCCTCAAAGCAATTTCCCATCTTCCTAATCTCAAGTTTCTTGTCTATGGCGCAACCAGCCATTTAAAGTATCATTTCTCTACTCTAGCTTCAGTTGAGCTTGCCTTAAATCAGAAACCTCTCTCTCCTGGTGACCTAATTTCTGCCATTAACTTTACTGAGCTCCGACGAAGCTATGTGGAAAAGCGAATTTGTAATCTCAGGTCACCTGATACTCCGCTCAATGTCCTCAAACTTCTTCAAAAGCATGGCTTCACTGAATCTCAAATGCTAGCTACTATCAGCAGGCATCCTCCCGTACTCTTCGCAAATGCTGAGAAGATCCTCAAGCCAAAACTTGACTTCTTCCAGCAATTAGGTATTGTGGGTTCTGACCTGGGGAAGTTTATTTCTCGTCATCCTAATCTTTTGTCTGTTAGCTTGGAGAAAACTTTGGTACCCAGTGTAGAGATTCTCAGAGATATTATCAACGTCCGTTCTGGCAAACAAAACTTCGAAACGTTATTGCAGAAATGTGGCTATGTGTTGCCTAGAACTTTACGTTTGATGAGCAACATTGCCTTCTTTCAGGGTTGTGGGATTGTTGGGTCTCAACTTTTATTATTGCTCAAGAGGAAGCCTAGGCTTTTCATTTCACCTGAGTCGCGGGTTAAAGATATTTTTGCACGGGCTAGAGACCTGGGTTTCTCCATGCATTCGGGGATGTTTGTTCACGCAGTGGTGTCATTAGCTGGTGTTAGTGTTGTAACATGCAAGAGAAAGCTGAAACTTTTCAGCAGCTTTGGCTTTACTAACCAAGAGATCATGCAAATGTTTGCTGGTGGTCCGAATTTACTCAAGTGCGCTGAGGATAAGTTGAAAATTGGACTTGAATTCTACTTGTCTACTATGCAGTTAGAGAAGTCAGCCTTGGTTCATTTCCCTCCGTGCTTGATGTATAGCATTGGAAAACGTGTAATTCCCCGATACAAGGTTTTGAAGATGATAGGGTCAAAGAATTTGCTGAAAAGGCAGCCAAGTTTTTTTTCGATTTTAACTATCTCTGAGGATAAATTTTTGCAGAAATTTATTTTTGCTTTCCAAGAGGACGTGGAAGAGTTGTTGGTTGTTTATAAGGGTCAGGCTATTTATGAGCAACAAACTTTTTCTTCAAGATAA 1164 0.4098 MCFLKAISHLPNLKFLVYGATSHLKYHFSTLASVELALNQKPLSPGDLISAINFTELRRSYVEKRICNLRSPDTPLNVLKLLQKHGFTESQMLATISRHPPVLFANAEKILKPKLDFFQQLGIVGSDLGKFISRHPNLLSVSLEKTLVPSVEILRDIINVRSGKQNFETLLQKCGYVLPRTLRLMSNIAFFQGCGIVGSQLLLLLKRKPRLFISPESRVKDIFARARDLGFSMHSGMFVHAVVSLAGVSVVTCKRKLKLFSSFGFTNQEIMQMFAGGPNLLKCAEDKLKIGLEFYLSTMQLEKSALVHFPPCLMYSIGKRVIPRYKVLKMIGSKNLLKRQPSFFSILTISEDKFLQKFIFAFQEDVEELLVVYKGQAIYEQQTFSSR* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00143 387 FunFam Mitochondrial transcription termination factor-like 143 366 - -
Pte8g00143 387 SMART mt_12 303 334 IPR003690 GO:0003690|GO:0006355
Pte8g00143 387 SMART mt_12 202 232 IPR003690 GO:0003690|GO:0006355
Pte8g00143 387 SMART mt_12 129 161 IPR003690 GO:0003690|GO:0006355
Pte8g00143 387 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Pte8g00143 387 Gene3D Transcription termination factor 3, mitochondrial 163 368 IPR038538 -
Pte8g00143 387 PANTHER CGI-12 PROTEIN-RELATED 58 360 IPR003690 GO:0003690|GO:0006355
Pte8g00143 387 Pfam mTERF 79 163 IPR003690 GO:0003690|GO:0006355
Pte8g00143 387 Pfam mTERF 184 355 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00143 Pte-Chr8 2497471 2498983 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte8g00143 mTERF 2.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00143 K15031 - jre:108985778 313.923