Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00136 ATGGATGAAAATCCTTCTGTTCCTGTAGTTGCATGGTGTCGACCCAGTGTTACTGCTCCTACTACTCTTTCATTTGTTGGTGGAGCATGTGGATATGGGTCATTAGTTGACGTGAAGCCATTGAAGGCACTAGTGGGTGCAGTTGGGCTAGTCCGTTCAAGAATGGTGAAGGATGTGGGGATATGCTCAAGGAGAGCTGTCACTGTTATAATCACCGACCAGTGCCCTGGCTGTCCTTTAGACAGAACCCACTTCTACCTCAGAGGTGCTGCTTTTGGGCCCATGCATGGCTGTCGCCGATTACCAGAAGTCAGGCAGACGAGAAAGGGCATGTACATAGAAAAGATTGATTCCCTACGGAACTTGATCCAGAACCTTTGGGCAAGGCCAGCTCCAGTGTCGACAGATGGCACAAGTGACTTTAGAGCTACTACCATTGGTGAGGGAGATGATATGGAAGATCCTCGAGATTAG 474 0.4895 MDENPSVPVVAWCRPSVTAPTTLSFVGGACGYGSLVDVKPLKALVGAVGLVRSRMVKDVGICSRRAVTVIITDQCPGCPLDRTHFYLRGAAFGPMHGCRRLPEVRQTRKGMYIEKIDSLRNLIQNLWARPAPVSTDGTSDFRATTIGEGDDMEDPRD* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00136 157 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 95 IPR007112 -
Pte8g00136 157 SUPERFAMILY Barwin-like endoglucanases 19 97 IPR036908 -
Pte8g00136 157 Gene3D - 12 109 IPR036908 -
Pte8g00136 157 MobiDBLite consensus disorder prediction 133 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00136 Pte-Chr8 2423888 2426589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00136 27 153 Expansin Gene Family AT4G28250 40.426 7.80e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00136 K20628 - qsa:O6P43_028797 98.9821